Entry information : PatrPrx10
Entry ID 3138
Creation 2008-08-27 (Christophe Dunand)
Last sequence changes 2011-02-01 (Qiang Li)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-02-04 (Christophe Dunand)
Peroxidase information: PatrPrx10
Name PatrPrx10
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus alba x Populus tremula var. glandulosa    [TaxId: 153471 ]
Cellular localisation N/D
Tissue type Cell culture
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PatrPrx10
start..stop
S start..stop
PtPrx10 608 0 1..329 1..321
PtPrx89 547 0 1..329 2..329
PtPrx90 493 2e-177 2..329 1..330
PnPrx90 492 5e-177 2..329 1..329
Literature and cross-references PatrPrx10
Literature Lee,H., Lee,J.S., Noh,E.W., Bae,E.K., Choi,Y.I. and Han,M.S. Generation and analysis of expressed sequence tags from poplar (Populus alba x P. tremula var. glandulosa) suspension cells. Plant Sci. 169 (6), 1118-1124 (2005).
EST ref. GenBank:   CX658852.1 [5' end]   CX654779.1 [3' end]
Protein sequence: PatrPrx10
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   329 (303)
PWM (Da):   %s   35999.9 (33058.4)  
PI (pH):   %s   8.08 (7.31) Peptide Signal:   %s   cut: 27 range:27-329
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVSSKKLTQL CVTFWVAVLF CRSVQSHLQV GFYRNSCGRA ESIVRGAVRD ALRQDRGVAA GLVRLHFHDC FVRGCEGSVL LDSTSSNKAE KDSPANYPSL RGFEVIDDAK ARLEAECKGV  VSCADILAFA ARDSFDLTGG FDYDVQAGRR DGIVSLASET YSNLPPPTFN VDQLTRRFSE KGFTQEEMVT LSGAHTIGNS NCRSFTYRLY NFSGTNSQDP SLDSKYAASL RKSCPQDSTD 
PNLEVPMDTR TPDIIDVNYY KDILANRGLF SSDQILLTNP ATASEVKSNA RSPSGWKKKF AAAMVKMGQI EVLTGNKGEI RANCRVINS 

Retrieve as FASTA  
Remarks Complete sequence from 7 ESTs.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
TTACAAAATT GTGGGCATAA TGGTGAGTTC CAAGAAGCTA ACTCAGCTGT GTGTAACTTT TTGGGTGGCA GTCCTGTTTT GTCGAAGTGT GCAATCTCAT CTTCAGGTAG GGTTCTATAG  AAATTCTTGC GGGAGGGCTG AGTCCATTGT GAGAGGTGCT GTTAGAGATG CTCTCAGGCA GGATAGAGGG GTCGCTGCTG GTCTTGTGAG ACTGCACTTT CATGATTGTT TTGTTAGGGG  TTGCGAGGGA TCTGTGCTTC TTGACTCCAC CTCGTCAAAC AAAGCAGAAA AGGACTCTCC TGCAAACTAC CCTAGTCTGC GTGGCTTTGA AGTCATTGAC GACGCAAAGG CTAGACTAGA  AGCGGAGTGT AAAGGAGTCG TTTCGTGTGC TGATATTCTC GCATTTGCAG CGAGGGATAG CTTTGATTTA ACTGGAGGGT TTGACTATGA TGTTCAAGCA GGAAGAAGAG ATGGCATTGT  TTCACTAGCC TCGGAGACTT ACTCCAACTT ACCTCCCCCA ACCTTTAATG TCGATCAACT CACTCGGAGA TTTTCGGAAA AGGGTTTCAC TCAAGAAGAA ATGGTTACAC TCTCTGGAGC  ACACACCATC GGTAATTCAA ATTGCAGGTC CTTCACTTAT AGATTATACA ACTTCAGTGG CACAAATAGC CAAGACCCGA GCTTGGATTC CAAATATGCA GCCAGTCTGA GGAAGAGTTG  CCCGCAAGAT AGTACAGATC CTAACTTGGA GGTGCCAATG GACACTCGAA CTCCCGACAT CATTGATGTA AATTACTACA AGGATATACT GGCAAACCGA GGCTTGTTCA GTTCAGATCA  AATTCTCTTG ACCAACCCAG CAACAGCAAG TGAAGTGAAA TCGAATGCAA GGAGTCCTTC AGGTTGGAAG AAAAAATTTG CTGCAGCAAT GGTGAAAATG GGCCAGATTG AAGTTCTGAC 
AGGAAACAAA GGAGAGATTC GGGCAAATTG TAGGGTCATT AACAGCTGAA GTTAGGAGCT ACCTGAACTG TTGTGCAACT TATTTGAAGC TCGAAGACTC GA 

Retrieve as FASTA