Entry information : PbPrx07
Entry ID 3153
Creation 2006-07-21 (Claudia Cosio)
Last sequence changes 2010-07-05 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2010-07-05 (Christophe Dunand)
Peroxidase information: PbPrx07
Name PbPrx07
Class Class III peroxidase     [Orthogroup: Prx034]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus balsamifera (trichocarpa x deltoides)    [TaxId: 3695 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PbPrx07
start..stop
S start..stop
PtPrx07 484 2e-175 1..231 115..345
PtPrx64 431 8e-154 1..231 147..377
MePrx10 422 9e-151 1..230 118..347
RcPrx49 420 5e-150 1..230 123..352
Literature and cross-references PbPrx07
Literature Ralph,S. et al., Genomics of hybrid poplar (Populus trichocarpax deltoides) interacting with forest tent caterpillars (Malacosoma disstria): normalized and full-length cDNA libraries, expressed sequence tags, and a cDNA microarray for the study of insect-induced defences. Mol Ecol 15 (5), 1275-1297 (2006).
EST ref. GenBank:   CV276131.1 [3' end]
Protein sequence: PbPrx07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   231
PWM (Da):   %s   25670.38  
PI (pH):   %s   10.18
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
RVEGFQTISK AKDLVERKCP GIVSCADILA IAARDYVHLA GGPYYQVKKG RWDGKISMAS RVPYNIPRAN FTIDQLLKLF NSKGLTLEDL VVLSGAHTFG FAHCKQFVSR LYNYRGTKQP 
DPGMDPRLLK ALKMSCPQFG GNPDIIAPFD VTTPFLFDHA YYGNLEAKLG LLASDQALFL DPRTKPLVQQ LGKDKKSFFQ AFSIAMEKMG SIGVKRGRRH GETRRVCSMH T 

Retrieve as FASTA  
Remarks Partial sequence from 1 EST. 5' end is missing. Cultivar="H11-11".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
AGGGTGGAGG GATTTCAGAC TATAAGCAAG GCCAAGGACT TGGTGGAGAG AAAGTGCCCT GGTATTGTTT CTTGTGCAGA CATTCTTGCA ATTGCAGCCA GAGATTATGT CCACCTCGCA  GGAGGTCCTT ATTACCAGGT GAAGAAAGGG AGGTGGGATG GGAAAATATC AATGGCATCT AGGGTGCCGT ACAACATCCC TCGTGCAAAT TTCACCATTG ATCAACTACT AAAACTCTTC  AACTCTAAAG GACTAACACT TGAGGACCTA GTCGTTCTTT CTGGTGCTCA TACATTTGGA TTTGCTCACT GTAAGCAATT TGTTAGCCGA CTCTACAATT ACCGTGGCAC TAAACAGCCT  GATCCTGGCA TGGATCCAAG GCTACTAAAA GCTCTTAAAA TGTCCTGCCC ACAATTCGGT GGGAATCCAG ACATTATTGC ACCATTTGAT GTTACAACTC CGTTCTTGTT TGATCATGCT  TATTATGGGA ATTTAGAGGC TAAATTGGGG TTGTTGGCCT CGGACCAAGC TCTATTTTTG GACCCAAGAA CCAAGCCCTT GGTTCAACAA TTAGGAAAGG ATAAGAAAAG TTTCTTCCAA  GCATTTTCAA TAGCTATGGA GAAAATGGGC TCAATTGGTG TGAAAAGGGG AAGAAGACAT GGAGAGACGA GGAGAGTTTG CAGTATGCAT ACATAATTGG ATTTATTATT TTTTTTAATT  TCCTTATTTT CTCGTTGTGG TAGATGTTTT GGGCTTTAAT ATTTTGGGGT TTGAAATTTG TAGTGAATGT CAGGAGATTT TGAGATAAAT CATTCACGGA ATAACATTCA TCATATATAT 
AATTTATCTT CAAAAAAAAA AAAAAAAAA 

Retrieve as FASTA