Entry information : RsPrx02 (prx2)
Entry ID 316
Creation 2006-05-26 (Christophe Dunand)
Last sequence changes 2015-12-07 (Christophe Dunand)
Sequence status complete
Reviewer Achraf Jemmat
Last annotation changes 2015-12-09 (Achraf Jemmat)
Peroxidase information: RsPrx02 (prx2)
Name (synonym) RsPrx02 (prx2)
Class Class III peroxidase    [Orthogroup: Prx040]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Raphanus
Organism Raphanus sativus (Chinese radish)    [TaxId: 3726 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RsPrx02
start..stop
S start..stop
BrPrx23-1Aa_other 611 0 1..350 1..350
BrPrx22-1Aa_other 523 0 1..350 1..350
AruPrx23 516 0 1..350 1..349
AlyPrx23 514 0 1..350 1..349
Literature and cross-references RsPrx02 (prx2)
Literature Wang,L., Burhenne,K., Kristensen,B.K. and Rasmussen,S.K. A peroxidase purified and cloned from roots of Chinese red radish(Raphanus sativus var. niger) from a subclass in Brassicaceae can metabolise pelargonidin
Protein ref. UniProtKB:   Q6EVC9
mRNA ref. GenBank:   AJ781007.1 [3' end]
EST ref. GenBank:   FY443995.1 [5' end]   FY442238.1 [3' end]
Protein sequence: RsPrx02 (prx2)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   351 (321)
PWM (Da):   %s   38321.28 (35269.7)  
PI (pH):   %s   8.05 (7.68) Peptide Signal:   %s   cut: 30 range:30-350
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGVSRSFSCR AMGALILGCL LLQASTSNAQ LRPDFYFRTC PGVFLIVGKV IVEELGSDPR IAASLLRLHF HDCFVNGCDA SVLLDNSTSF RTEKEALPNL NSARGFDVVD RMKAEIERAC  PRTVSCADVL AIAAQISVLL SGGPWWPVSL GRKDGFEAFF DLSNTALPSP FATLAELKTV FSDAGLNRTS DLVALSGAHT FGRAQCIVIT PRLYNFNGTN KPDPSINPTF LTELRNLCPE 
NGNPTVLANF DRATPNTFDS HYYTNLRQGE RCNPERSRTL LDSRSRHNST GGTIQQNTFE FFTAFSKSMV RMGKLKPLTG TQGEVRLNCR VVNSRTRGVE NEDDGVVSSI * 

Retrieve as FASTA  
Remarks Partial sequence from mRNA, 5'is missing.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGGTTT CTCGTTCATT TTCTTGTAGG GCTATGGGAG CCCTAATATT GGGTTGCCTT CTCCTTCAAG CATCAACCTC CAATGCTCAG TTAAGGCCTG ATTTCTATTT CCGAACATGC  CCGGGTGTTT TCCTTATCGT TGGGAAAGTC ATCGTCGAAG AATTGGGGAG TGATCCTCGT ATTGCTGCTA GCCTCCTCCG CCTTCATTTC CATGACTGTT TTGTTAACGG CTGCGATGCA  TCGGTCCTAC TCGACAATTC CACGTCATTC AGGACCGAGA AAGAAGCTCT TCCGAACTTA AACTCGGCAA GAGGGTTTGA TGTTGTAGAT AGAATGAAAG CCGAGATTGA GAGAGCTTGT  CCAAGAACAG TGTCTTGTGC AGATGTTCTC GCCATCGCTG CCCAAATATC AGTGCTTTTG TCAGGAGGTC CATGGTGGCC GGTTTCACTG GGGAGGAAAG ACGGGTTCGA GGCTTTCTTT  GATCTATCTA ATACAGCTCT TCCTTCTCCA TTTGCCACTC TTGCTGAACT CAAAACAGTT TTTAGTGACG CTGGTCTAAA CCGCACCTCA GATCTAGTTG CTCTTTCTGG CGCTCACACA  TTTGGAAGAG CACAATGTAT AGTAATCACA CCTCGTCTCT ACAACTTCAA CGGTACCAAT AAACCTGACC CAAGTATAAA CCCAACTTTC CTCACCGAAC TCCGTAATCT GTGCCCTGAA  AACGGGAACC CGACAGTTCT AGCCAACTTT GACCGAGCGA CTCCAAATAC TTTCGATAGT CATTACTACA CCAATCTTCG TCAAGGGGAA AGGTGTAATC CAGAGCGATC AAGAACTCTT  CTCGACTCCA GGAGCCGACA CAATTCGACT GGTGGAACTA TACAGCAAAA CACGTTCGAG TTCTTTACGG CATTCTCTAA ATCAATGGTT CGAATGGGAA AACTTAAACC TTTGACTGGA 
ACTCAAGGCG AGGTAAGACT GAATTGTAGG GTTGTGAACT CGAGAACTAG GGGTGTGGAG AATGAAGATG ATGGAGTTGT GAGCTCGATT TGA 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGGGGTTT CTCGTTCATT TTCTTGTAGG GCTATGGGAG CCCTAATATT GGGTTGCCTT CTCCTTCAAG CATCAACCTC CAATGCTCAG TTAAGGCCTG ATTTCTATTT CCGAACATGC  CCGGGTGTTT TCCTTATCGT TGGGAAAGTC ATCGTCGAAG AATTGGGGAG TGATCCTCGT ATTGCTGCTA GCCTCCTCCG CCTTCATTTC CATGACTGTT TTGTTAACGG CTGCGATGCA  TCGGTCCTAC TCGACAATTC CACGTCATTC AGGACCGAGA AAGAAGCTCT TCCGAACTTA AACTCGGCAA GAGGGTTTGA TGTTGTAGAT AGAATGAAAG CCGAGATTGA GAGAGCTTGT  CCAAGAACAG TGTCTTGTGC AGATGTTCTC GCCATCGCTG CCCAAATATC AGTGCTTTTG TCAGGAGGTC CATGGTGGCC GGTTTCACTG GGGAGGAAAG ACGGGTTCGA GGCTTTCTTT  GATCTATCTA ATACAGCTCT TCCTTCTCCA TTTGCCACTC TTGCTGAACT CAAAACAGTT TTTAGTGACG CTGGTCTAAA CCGCACCTCA GATCTAGTTG CTCTTTCTGG CGCTCACACA  TTTGGAAGAG CACAATGTAT AGTAATCACA CCTCGTCTCT ACAACTTCAA CGGTACCAAT AAACCTGACC CAAGTATAAA CCCAACTTTC CTCACCGAAC TCCGTAATCT GTGCCCTGAA  AACGGGAACC CGACAGTTCT AGCCAACTTT GACCGAGCGA CTCCAAATAC TTTCGATAGT CATTACTACA CCAATCTTCG TCAAGGGGAA AGGTGTAATC CAGAGCGATC AAGAACTCTT  CTCGACTCCA GGAGCCGACA CAATTCGACT GGTGGAACTA TACAGCAAAA CACGTTCGAG TTCTTTACGG CATTCTCTAA ATCAATGGTT CGAATGGGAA AACTTAAACC TTTGACTGGA  ACTCAAGGCG AGGTAAGACT GAATTGTAGG GTTGTGAACT CGAGAACTAG GGGTGTGGAG AATGAAGATG ATGGAGTTGT GAGCTCGATT TGATTATGTC GAGGTTATGG ATATGTAAGA  AAGTATACAA TGCGTGGGGA ACTATATATG TATTTAGACT TAATAAATGT CGTATCGAGT TTTGTATTAA AAATAATGAA AGTTGGCAAA AAGTTGACAC TTGTAATTCT TGTTTGATTT 
CTATTTTCTG ATTACT 

Retrieve as FASTA