Entry information : BnPrx41-2_other
Entry ID 3161
Creation 2006-05-24 (Christophe Dunand)
Last sequence changes 2006-05-24 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2009-08-17 (Christophe Dunand)
Peroxidase information: BnPrx41-2_other
Name BnPrx41-2_other
Class Class III peroxidase     [Orthogroup: Prx009]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx41-2_other
start..stop
S start..stop
BrPrx41-1Ab_other 433 7e-156 1..211 1..211
BnPrx41-4_other 424 2e-153 1..211 1..211
BoPrx41-1Cb_other 424 2e-152 1..211 1..211
AlyPrx41 376 2e-133 4..211 2..209
Literature and cross-references BnPrx41-2_other
Literature REFERENCE 1 Town,C.D., Shetty,J., Scott,R., Koo,H., Trick,M. and Bancroft,I. BAC end sequence of Brassica napus, Unpublished (2005)
REFERENCE 2 Malik,M.R., Wang,F., Dirpaul,J.M., Zhou,N., Polowick,P.L., Ferrie, A.M. and Krochko,J.E. Transcript profiling and identification of molecular markers for early microspore embryogenesis in Brassica napus. Plant Physiol 144 (1), 134-154 (2007)
DNA ref. GenBank:   DU105156 [5' end]
EST ref. GenBank:   GR437033.1 [5' end]
Cluster/Prediction ref. UniGene:   Bna.16095 [5' end]
Protein sequence: BnPrx41-2_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   211 (189)
PWM (Da):   %s   23036.72 (20485.3) Transmb domain:   %s   i5-27o
PI (pH):   %s   6.86 (6.86) Peptide Signal:   %s   cut: 23 range:23-211
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLTSWFLNVF FLVLAFVPLI LSAPATSLTK DYYQKTCPDF SKIVRETVTP KQAQQPTTAA GTLRVFFHDC FLEGCDASVL VATNSFNKAE RDDELNESLP GDAFDIVTRI KTALELSCPG 
VVSCADILAQ STRDLITIVG GPFYEVKLGR KDGFESKAHK VHGNIPIANH TVHDMMSIFK KNGFSLKEMV ALSGGHTVGF AHCIEFSSRL F 

Retrieve as FASTA  
Remarks Partial sequence from 1 GSS (without intron) and 4 ESTs. 3' end is missing. Cultivar="Tapidor".