Entry information : BnPrx71-1Ca_other
Entry ID 3165
Creation 2009-08-13 (Christophe Dunand)
Last sequence changes 2009-08-13 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2018-02-14 (Christophe Dunand)
Peroxidase information: BnPrx71-1Ca_other
Name BnPrx71-1Ca_other
Class Class III peroxidase    [Orthogroup: Prx007]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica napus (oilseed rape)    [TaxId: 3708 ]
Cellular localisation N/D
Tissue types Germinating seeds
Whole plant
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BnPrx71-1Ca_other
start..stop
S start..stop
BrPrx71-1Aa_other 659 0 1..328 1..328
TsPrx71 608 0 1..328 1..327
AhalPrx30 598 0 1..328 1..328
BstrPrx24 597 0 1..328 1..328
Literature and cross-references BnPrx71-1Ca_other
Literature REFERENCE 1 Town,C.D., Shetty,J., Scott,R., Koo,H., Trick,M. and Bancroft,I. BAC end sequence of Brassica napus, Unpublished (2005)
REFERENCE 2 Tsang,E. Gene expression in seed germination in Brassica napus
DNA ref. GenBank:   DU104281.1 [5' end]
EST ref. GenBank:   ES909267.1 [5' end]   ES905127.1 [3' end]
Cluster/Prediction ref. UniGene:   Bna.17648
Protein sequence: BnPrx71-1Ca_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (305)
PWM (Da):   %s   34587.46 (32021.1) Transmb domain:   %s   i7-26o
PI (pH):   %s   8.43 (8.41) Peptide Signal:   %s   cut: 24 range:24-328
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MNFVRSLCVF ITFLSCIVIS VHGQAAARPG PGSGTRIGFY STTCPNAETI VRNAVTAGFS SNPRIAPGIL RMHFHDCFVQ GCDGSILITG TNTERTAVPN LNLRGFEVID NAKTQLEAAC  PGVVSCADIL ALAARDSVVL TRGTSWPVPT GRRDGRVSLA SNANNLPGPG DSVAVQQQKF SALGLSTREL VVLVGGHTIG TAGCATFRNR LFNSTTGPAD PTIDPTFLAQ LQTQCPQNGD 
ASVRVDLDTG SATTFDTSYF NNLSRGRGVL QSDQVLWTDP ATRPIVQQLM SPRSTFNADF ARAMVRMSNI GVLTAASGEI RRVCSAVN 

Retrieve as FASTA  
Remarks Complete sequence from 10 ESTs and 1 GSS (No intron 1?, intron 2). Cultivar="Tapidor".