Entry information : BoPrx17_other
Entry ID 3188
Creation 2006-08-09 (Christophe Dunand)
Last sequence changes 2006-08-09 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2009-08-12 (Christophe Dunand)
Peroxidase information: BoPrx17_other
Name BoPrx17_other
Class Class III peroxidase    [Orthogroup: N/D] N/D
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx17_other
start..stop
S start..stop
BstrPrx75 81 1e-20 7..59 3..55
BrPrx17-1Ab_other 81 2e-20 1..59 1..59
AtPrx17 79 4e-20 1..59 1..59
CrubPrx17-1A 79 4e-20 3..59 4..62
Literature and cross-references BoPrx17_other
Literature Delehaunty,K., Fewell,G., Fulton,L., McCombie,W.R., Miner,T., Nash ,W., Rabinowicz,P.D. and Wilson,R.K. Whole genome shotgun reads from Brassica oleracea. Unpublished (2002)
DNA ref. GenBank:   BZ018109.1 [5' end]
Protein sequence: BoPrx17_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   58 (38)
PWM (Da):   %s   6424.35 (4212.1)  
PI (pH):   %s   6.79 (5.68) Peptide Signal:   %s   cut: 21 range:21-58
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2

MSLFNPHLIL HLLLLTVVTG *ILRPKFYSE TCPEAESLVT TEMNKALFTE ARSVPSHMR 

Retrieve as FASTA  
Remarks Partial sequence from 1 GSS. Exon 1 only. Stop codon in the sequence. No EST.