Entry information : BoPrx19_other
Entry ID 3189
Creation 2006-05-26 (Christophe Dunand)
Last sequence changes 2006-05-26 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2006-05-26 (Filippo Passardi)
Peroxidase information: BoPrx19_other
Name BoPrx19_other
Class Class III peroxidase     [Orthogroup: Prx034]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx19_other
start..stop
S start..stop
BnPrx19_other 323 4e-112 159..350 1..191
BrPrx19-2Aa_other 328 5e-112 158..350 157..348
BrPrx19-2Aa_other 163 1e-47 1..89 1..89
BrPrx19-1Aa_other 327 1e-111 158..350 127..318
BrPrx19-1Aa_other 102 6e-25 1..59 1..59
AtPrx19 291 3e-97 158..350 155..346
AtPrx19 130 2e-35 1..89 1..87
Literature and cross-references BoPrx19_other
Literature Delehaunty,K., Fewell,G., Fulton,L., McCombie,W.R., Miner,T., Nash ,W., Rabinowicz,P.D. and Wilson,R.K. Whole genome shotgun reads from Brassica oleracea. Unpublished (2002)
DNA ref. GenBank:   23689792
Protein sequence: BoPrx19_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   350 (324)
PWM (Da):   %s   28474.96 (25600.4)  
PI (pH):   %s   10.61 (10.54) Peptide Signal:   %s   cut: 27 range:27-350
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHVLSLTSSL IFRFLFLIST IPISSAKPIT SHPQTLPRHR HRELSTDYYS KKCPQLESLV GSVTSQRFKE APVSAPATIR LFFHDCFVEx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx  xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxAGG PYYQVKKGRW DGKRSTATNV PPNIPRSNST VDQLIKLFAS KGLTVEDLVx xxxxxxxxxx xxxxxxxxxx xxxxxxRRPD 
PNINPKLLKE LRMYCPFSGR SSRAALPLDA TTPFAFDNGY YRGLGSSMGL LGSDQALFLD PRTKPIVLEM ARDKQKFLKA FGDAMDKMGS IGVKRGRKHG EIRKDCRVFL 

Retrieve as FASTA  
Remarks Partial sequence from 4 GSS (Exon 1: BZ047273, BH684724 (intron 1 (~350 nt) and Exon 3 and 4: BZ072093, BH684711 (HTIG is missing)).