Entry information : CmPrx02 (NAPOD)
Entry ID 319
Creation 2005-06-21 (Christophe Dunand)
Last sequence changes 2005-06-21
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2007-12-28 (Christophe Dunand)
Peroxidase information: CmPrx02 (NAPOD)
Name (synonym) CmPrx02 (NAPOD)
Class Class III peroxidase    [Orthogroup: Prx001]
Taxonomy Eukaryota Viridiplantae Streptophyta Cucurbitaceae Cucumis
Organism Cucumis melo (muskmelon)    [TaxId: 3656 ]
Cellular localisation N/D
Tissue type N/D
Inducer Suberization
Repressor N/D
Best BLASTp hits
Perox score E-value CmPrx02
start..stop
S start..stop
CsaPrx03 608 0 9..345 3..338
CsaPrx02 533 0 19..287 1..269
CpPrx01 481 2e-172 24..345 14..325
CsaPrx01 461 7e-165 13..345 5..329
Literature and cross-references CmPrx02 (NAPOD)
Literature Keren-Keiserman,A., Tanami,Z., Shoseyov,O. and Ginzberg,I.
Peroxidase activity associated with suberization processes of the muskmelon (Cucumis melo) rind
Protein ref. UniProtKB:   Q6UBM4
mRNA ref. GenBank:   AY373372
Protein sequence: CmPrx02 (NAPOD)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa): %sProtein length in amino acid 345 (319)
PWM (Da): %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
37061.43 (34575.2) Transmb domain: %sTransmembrane domain
Calculation done with TMHMM
The topology is given as the position of the transmembrane helices
separated by i if the loop is on the inside or o if it is on the outside.
For example i7-29o44-66i87-109o means that it starts on the inside,
has a predicted TMH at position 7 to 29, the outside, then a TMH at position 44-66 etc.
i7-29o
PI (pH): %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
5.77 (5.77) Peptide Signal: %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 27 range:27-345
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASASSANAA ITSFFFLALL IGGSSAQLSE TFYDQTCPRL ANVVRASVRK AIESDIRAGA KLIRLHFHDC FVNGCDGSVL LEDAPGIVSE LNSPGNQGIQ GLEIVDAIKA DVEKECPGIV  SCADILAQAS KDSVDVQGGP SWRVLYGRRD SRIANKTGAD SNLASPFETL DQLKAKFKNV GLNTVDLVAL SGAHTFGRSR CRFFSHRFAN FNNTGSPDPS LNPDYRRFLE GVCSAGADTR 
ANFDPVTPDI FDKNYYTNLQ VGKGLLQSDQ ELFSTPGADT IPIVNSFAAR EGTFFKEFRQ SMINMGNIQP LTGGQGEIRR NCRRVNSNSG LFFGGEGEGE GRDVM 

Retrieve as FASTA  
Remarks mRNA