Entry information : BoPrx27_other
Entry ID 3191
Creation 2006-05-26 (Christophe Dunand)
Last sequence changes 2006-05-26 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2009-08-12 (Christophe Dunand)
Peroxidase information: BoPrx27_other
Name BoPrx27_other
Class Class III peroxidase     [Orthogroup: Prx011]*
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica oleracea (Cauliflower)    [TaxId: 3712 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BoPrx27_other
start..stop
S start..stop
BrPrx27-1Ab_other 520 0 1..319 1..319
BrPrx27-1Aa_other 508 0 1..319 1..319
BnPrx27-1_other 503 0 1..319 1..319
TsPrx27 482 1e-173 1..319 1..321
Literature and cross-references BoPrx27_other
Literature Delehaunty,K., Fewell,G., Fulton,L., McCombie,W.R., Miner,T., Nash ,W., Rabinowicz,P.D. and Wilson,R.K. Whole genome shotgun reads from Brassica oleracea, Unpublished (2002)
DNA ref. GenBank:   BH531554 [5' end]   BH499418 [3' end]   BZ005315 [Fragment]
Protein sequence: BoPrx27_other
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   319 (296)
PWM (Da):   %s   29239.22 (26797.8)  
PI (pH):   %s   9.75 (9.75) Peptide Signal:   %s   cut: 24 range:24-319
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVASKRLVVS CFLLVLLLAE ANAQGLKVGF YSKTCPHAEG IVRKVVFAAM KKAPTLGAPL LRMFFHDCFV RGCDGSVLLD SSNNQAEKNA VPNLSLRGFG IIDDSKAALE KVCPGIVSCS  DILALIARDA MVALEGPSWE VETGRRDGRV SNINEVNLPS PFDNIAKLIT DFAQRxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxxxxxx xxxxxKKCKP TDTTTALEMD 
PGSFKTFDVS YFKLVAKRRG LFQSDAALLD NSKTRAYVLQ QARGSTFFHD FGVSMVKMGR IGVLTGRTGE IRKMCRVPN 

Retrieve as FASTA  
Remarks Partial sequence from 7 GSS. Exon 1, 2 and 3: BZ005315, BH531554, BZ017636, BH954781 and end of exon 4: BH499418, BH948679, BH436431.