Entry information : PalPrx03 (PaPO3)
Entry ID 3217
Creation 2006-05-31 (Claudia Cosio)
Last sequence changes 2010-06-18 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2010-06-18 (Christophe Dunand)
Peroxidase information: PalPrx03 (PaPO3)
Name (synonym) PalPrx03 (PaPO3)
Class Class III peroxidase     [Orthogroup: Prx006]*
Taxonomy Eukaryota Viridiplantae Streptophyta Salicaceae Populus
Organism Populus alba    [TaxId: 43335 ]
Cellular localisation N/D
Tissue type Mixed tissues
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PalPrx03
start..stop
S start..stop
PtPrx01 638 0 1..321 25..345
PtPrx98 600 0 1..321 26..349
PkPrx03 582 0 1..321 26..347
HbPrx01 491 2e-176 2..321 25..346
Literature and cross-references PalPrx03 (PaPO3)
Literature Sasaki,S., Shimizu,M., Wariishi,H., Kondo,R. and Tsutsumi,Y. Populus alba mRNA for peroxidase expressed in multiple tissue. Published Only in Database (2006).
DNA ref. GenBank:   AB260989.1 [3' end]
Protein sequence: PalPrx03 (PaPO3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   321
PWM (Da):   %s   33906.72  
PI (pH):   %s   4.43
Sequence
Send to BLAST
Send to Peroxiscan
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YAYAQLTPTF YDGTCPNVST IIRGVLVQAL QTDPRIGASL TRLHFHDCFV DGCDGSILLD NTDTIESEKE AAPNNNSARG FDVVDNMKAA VENACPGIVS CADILAIAAE ESVRLAGGPS  WTVPLGRRDS LIANRSGANS SIPAPFESLA VLKSKFAAVG LNTSSDLVAL SGAHTFGRAQ CLNFISRLYN FSGSGNPDPT LNTTYLAALQ QLCPQAGNRS VLTNLDRTTA DTFDGNYFSN 
LQTNEGLLQS DQELFSTTGA DTIAIVNNFS GNQTAFFESF VVSMIRMGNI SPLTGTDGEI RLNCRIVNNS TGSNALLVSS I 

Retrieve as FASTA  
Remarks Partial sequence from mRNA.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTATGCCTAT GCTCAGCTGA CTCCCACATT CTACGATGGA ACATGCCCGA ATGTGAGCAC CATCATTCGA GGAGTCCTTG TTCAGGCTTT GCAGACAGAT CCCAGGATTG GAGCCAGCCT  CACTCGACTT CATTTCCATG ATTGTTTTGT TGATGGTTGT GATGGATCGA TTCTTTTGGA CAACACTGAT ACTATAGAGA GTGAGAAAGA AGCTGCTCCA AATAATAATT CAGCAAGGGG  TTTTGATGTT GTTGATAACA TGAAGGCTGC AGTAGAGAAT GCTTGCCCTG GGATAGTTTC TTGTGCTGAT ATTCTCGCCA TTGCAGCTGA AGAGTCTGTT CGTTTGGCAG GAGGACCCTC  ATGGACAGTT CCTTTGGGAA GAAGAGACAG CTTAATAGCA AATAGAAGTG GTGCTAATTC TTCCATTCCG GCTCCCTTCG AGAGCCTTGC TGTTCTGAAA TCCAAGTTTG CAGCCGTGGG  CCTCAACACC AGTAGTGACC TGGTTGCCCT TTCAGGTGCT CACACATTTG GAAGAGCTCA ATGTTTAAAT TTCATCAGTA GATTGTATAA TTTTAGTGGC AGTGGCAATC CTGATCCAAC  ATTGAACACA ACGTATCTAG CAGCACTTCA ACAATTATGT CCTCAAGCTG GAAATCGGAG TGTTTTAACA AATCTTGATC GCACTACAGC CGATACTTTC GATGGCAACT ATTTTTCCAA  TCTTCAAACC AATGAAGGCC TGCTTCAGAG TGATCAAGAG TTGTTTTCTA CTACAGGTGC CGATACCATT GCCATTGTCA ACAATTTTAG TGGTAATCAG ACTGCTTTCT TTGAAAGCTT  TGTGGTGTCC ATGATTAGAA TGGGGAATAT TAGCCCCTTA ACTGGGACAG ATGGAGAGAT CAGATTGAAT TGCAGAATAG TCAACAACTC AACTGGATCA AATGCTCTTC TGGTTAGCTC  AATTTAAATG AGAAGACAAG ATTGAGATCA AATAAATGTC TGTATGATAT GGTGTGGCAT CAAATCTGCA TCTTTTGGCT GCTATTTGGT TATTTTGGCT TCTTGGTTTT TTGATCATTT  CATTTGATAG ATCTGCTAGA GCTGTAAGCA GACTTTTCTA TGTTTTCTAT GTCTTCCCCC CCCAGATCCT GGCGTCTTCT AATGCAATAT TATACTTCTC AAAAAATAAA AAAAAAAAAA 
AAA 

Retrieve as FASTA