Entry information : DrPGHS01 (ptgs1)
Entry ID 3363
Creation 2006-07-19 (Christophe Dunand)
Last sequence changes 2006-07-19 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2010-05-18 (Christophe Dunand)
Peroxidase information: DrPGHS01 (ptgs1)
Name (synonym) DrPGHS01 (ptgs1)
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Actinopterygii Cyprinidae Danio
Organism Danio rerio (Zebrafish)    [TaxId: 7955 ]
Cellular localisation Apoplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value DrPGHS01
start..stop
S start..stop
OmyPGHS01 962 0 1..597 28..624
SfoPGHS01 954 0 10..589 9..589
MunPGHS01 942 0 1..593 1..590
PretPGHS01 925 0 11..591 11..588
Literature and cross-references DrPGHS01 (ptgs1)
Literature Grosser T., Yusuff S., Cheskis E., Pack M.A., FitzGerald G.A. Developmental expression of functional cyclooxygenases in zebrafish. Proc. Natl. Acad. Sci. U.S.A. 99:8418-8423(2002).
Protein ref. UniProtKB:   Q8JH44
DNA ref. GenBank:   NW_001879042.1 (82590..43709)
Cluster/Prediction ref. UniGene:   Dr.18294
Protein sequence: DrPGHS01 (ptgs1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   597 (574)
PWM (Da):   %s   68805.7 (66181.3)  
PI (pH):   %s   7.85 (7.76) Peptide Signal:   %s   cut: 24 range:24-597
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRECNFLLKW TVILLLSVSF CAGEESPTSS NTANPCCYYP CQNQGICVRY GLERYECDCT RTGYYGENCT IPELWTRVYR LLKPSPNVVH YILTHFDWLW DLINRSFLRD WLMRKVLTVR  ANLIPSPPTY NSRYDYLNWE AYSNITYYTR ILPPVPNDCP TPMGTKGKIK LPDPKLLVEK FMLRRNFRLD PQGTNLMFAF FAQHFTHQFF KTHNRVGLGF TKGLGHGVDA GHIYGDSLDR  QLELRLHKDG KLKYQVLNGD IYPPTVLHAQ VKMSYPPSVP PEQQLAIGQE VFGLLPGLGM YATLWLREHN RVCEILKQEH PTWGDEQLFQ TARLIIIGET IRIVIEEYVQ HLSGYRLKLH  FDPTLLFNSQ FQYQNRISVE FNQLYHWHPL MPDSFYIDGD HIQYSKFIFN TSILTHYGLE KLVEAFSIQP AGQIGGGHNI HPVVSGVAER VIVESRELRL QPFNEYRKRF NLKPYTSFAE 
LTGEQEMSKE LEELYGHIDA MEFYPALLLE KTRPGAVFGE SMVEMGAPFS LKGLMGNPIC SPDYWKPSTF GGKTGFDIVN SATLKKLVCL NTKWCPYVSF HTPPSDYKPQ RTSHGEL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 5, 10 introns), 3 cDNA and 7 ESTs.