Entry information : RnoEPO (Epx)
Entry ID 3366
Creation 2006-08-28 (Christophe Dunand)
Last sequence changes 2006-08-28 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2008-08-13 (Christophe Dunand)
Peroxidase information: RnoEPO (Epx)
Name (synonym) RnoEPO (Epx)
Class Eosinophil peroxidase    [Orthogroup: EPO001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Muridae Rattus
Organism Rattus norvegicus (Norway rat)    [TaxId: 10116 ]
Cellular localisation N/D
Tissue types Liver
Ovaries
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RnoEPO
start..stop
S start..stop
MmEPO 1381 0 1..715 2..716
PtroEPO 1317 0 1..714 1..714
GgoEPO 1317 0 1..714 1..714
MmulEPO 1316 0 1..715 1..715
Literature and cross-references RnoEPO (Epx)
Literature Rat Genome Sequencing Project Consortium. Genome sequence of the Brown Norway rat yields insights into mammalian evolution. Nature 428 (6982), 493-521 (2004)
DNA ref. GenBank:   NW_047336 (17159209..17170293)
mRNA ref. GenBank:   NM_001107037
Cluster/Prediction ref. UniGene:   Rn.17695
Protein sequence: RnoEPO (Epx)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   715 (693)
PWM (Da):   %s   81101.41 (78792.1)  
PI (pH):   %s   10.67 (10.71) Peptide Signal:   %s   cut: 23 range:23-715
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MQLLLALLGV LATFILTQLA EGTVPAPPSP VENSVLQDCI AEAKLLVDTA YNRTQKSIVQ RLQSGSASPM DLLAYFKQPV AATRRVVQAA DYMHVALGLL EEKLQPQESR PFNVTDVLTE  PQLRLLSQAS GCALQDQVEK CSNKYRTITG RCNNRRRPWL GASNQALARW LPAEYEDHRS LPFGWTPGKR RNGFLLPLVR AVSNQIVRFP SKKLTSDQGR SLMFMQWGQF IDHDLDFTPE  SPARVTFNMG VDCEKTCAQL PPCFPIKIPP NDPRIKSQRD CIPFFRSAPA CPQNRNKVRN QINSLTSFVD ASMVYGSEVS LALRLRNRTN YLGLLATNQQ FQDNGRALLP FDNLHEDPCL  LTNRLVRIPC FLAGDSRASE TPKLAALHTL FVREHNRLAT ELKRLNPHWS GDKLYNEARK IVGAMVQIIT YRDFLPLVLG KARMRRTLGP YRGYCSNVDP RVANVFTLAF RFGHTMLQPF  MFRLDSQYRT SAPNSHVLLS SAFFASWRIV YEGGIDPILR GLMATPAKLN RQDSMLVDEL RDKLFQQVRR IGLDLAALNM QRSRDHGLPG YNAWRRFCGL SQPRNLAQLS RVLKNRNLAR 
KFLNLYKTPD NIDIWVGAIA EPLLPGARVG PLLACLFENQ FRRARDGDRF WWQKWGVFTK RQRKALRRIS LSRIVCDNTG ISTVSRDIFR ANIYPQGFVS CSRIPKLNLS AWRGK 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 10, 11 introns), mRNA and 4 ESTs.