Entry information : CroPrx01(CRO_T020133/ CRO_T011338 / prx1)
Entry ID 3451
Creation 2006-08-11 (Christophe Dunand)
Last sequence changes 2011-05-23 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-04-08 (Christophe Dunand)
Peroxidase information: CroPrx01(CRO_T020133/ CRO_T011338 / prx1)
Name CroPrx01(CRO_T020133/ CRO_T011338 / prx1)
Class Class III peroxidase    [Orthogroup: Prx003]
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue types Flower buds
Leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx01
start..stop
S start..stop
CroPrx03-1B_Other 590 0 22..363 24..360
CroPrx03-1B 590 0 22..363 24..360
CroPrx03-1A_other 584 0 22..363 29..365
CroPrx03-1A 583 0 22..363 29..365
Literature and cross-references CroPrx01(CRO_T020133/ CRO_T011338 / prx1)
Literature Costa,M.M., Hilliou,F., Pereira,L.G., Leech,M., Lopes Cardoso,I., Almeida,I., Memelink,J., Ros Barcelo,A. and Sottomayor,M. Molecular characterization of the major class III peroxidase present in the leaves of the medicinal plant Catharanthus roseus (L.) G. Don
Protein ref. UniProtKB:   Q0VYC8
mRNA ref. GenBank:   AM236087
EST ref. GenBank:   EG554725.1 [5' end]
Protein sequence: CroPrx01(CRO_T020133/ CRO_T011338 / prx1)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   363 (342)
PWM (Da):   %s   39758.11 (37609.9)  
PI (pH):   %s   7.77 (7.77) Peptide Signal:   %s   cut: 22 range:22-363
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAFSSSTSLL LLLISSLLIS AHFNNVHIVA QTTRPPTVSG LSYTFHNSRC PDLKSIVRNR LREVFQNDVE QAAGLLRLHF HDCFVQGCDS SVLLVGSASG PGEQAAPPNL TLRQQAFRII  DDLRRRVHSR CGRIVSCSDI LALAARDSVF LTGGPDYDIP LGRRDGLNFA TRADTIANLP PPTSNTSALL TSLATKNFNA TDVVALSGGH TIGIGHCPSF DERIYPNIDP TMDQTFARNL  RITCPTPDSN NRTFLDIRSP NVFDNRYYVD LMNRQGLFTS DQDLYTDRRT RGIVTDFAIN QTLFFEKFVY AMIKMSQLNV LTGNQGEIRS NCSLRNAAAM GRSSSSLLGS VVEEAAEIGL 
SMF 

Retrieve as FASTA  
Remarks Complete sequence from mRNA, ESTs and genomic; CRO_T011338 (only GGP to stop) and CRO_T020133 (exons 1 and 2)
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTTTT CTTCTTCAAC TTCTCTGCTG CTTCTTCTCA TTTCCTCCCT TTTGATTTCT GCCCACTTTA ATAATGTCCA TATTGTAGCT CAAACAACTC GGCCACCAAC AGTGAGTGGA  CTTTCATATA CCTTTCATAA TTCAAGGTGC CCTGACTTGA AATCTATTGT CAGAAACCGA CTCAGGGAGG TCTTCCAAAA CGATGTTGAA CAAGCTGCTG GCTTGCTTCG CCTTCATTTT  CATGATTGCT TCGTCCAGGG GTGCGATTCA TCAGTGCTGC TGGTGGGATC AGCAAGCGGA CCGGGAGAGC AGGCTGCGCC GCCTAACTTG ACTCTCCGTC AGCAGGCTTT CAGGATCATC  GATGACCTCC GGAGGCGCGT GCATAGTAGA TGTGGGAGAA TTGTTTCTTG CTCTGACATA CTTGCTCTCG CTGCCCGCGA CTCTGTTTTT CTGACAGGAG GTCCGGATTA TGATATTCCA  TTGGGAAGAA GAGATGGGCT TAACTTTGCA ACAAGGGCAG ACACAATAGC AAACCTTCCA CCACCAACAA GCAACACAAG TGCCCTCCTA ACTTCACTCG CAACCAAGAA TTTCAATGCC  ACAGATGTTG TAGCACTCTC AGGTGGCCAC ACAATTGGTA TAGGCCATTG CCCTTCTTTC GACGAAAGAA TCTATCCAAA CATAGATCCA ACAATGGACC AAACATTTGC AAGAAACCTA  AGAATAACAT GTCCAACACC AGATTCAAAT AATAGGACAT TTTTGGACAT TAGATCACCA AACGTATTTG ATAATAGGTA CTATGTTGAT CTAATGAACA GACAAGGACT TTTCACTTCT  GACCAAGATT TGTACACAGA TAGAAGAACA AGAGGTATTG TTACTGATTT TGCTATTAAT CAAACCTTGT TTTTCGAAAA GTTTGTTTAT GCAATGATAA AGATGAGTCA ATTGAATGTG  TTAACGGGGA ATCAAGGTGA AATTAGATCC AATTGTTCAC TTCGAAATGC TGCTGCCATG GGACGTTCTT CTTCCAGCTT ATTGGGATCG GTTGTGGAAG AGGCTGCTGA AATTGGCTTG 
TCTATGTTTT AA 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GATCCTCACA ATATAGATAG ATCTAGCTAA TTGGAAGGAA CCATGGCTTT TTCTTCTTCA ACTTCTCTGC TGCTTCTTCT CATTTCCTCC CTTTTGATTT CTGCCCACTT TAATAATGTC  CATATTGTAG CTCAAACAAC TCGGCCACCA ACAGTGAGTG GACTTTCATA TACCTTTCAT AATTCAAGGT GCCCTGACTT GAAATCTATT GTCAGAAACC GACTCAGGGA GGTCTTCCAA  AACGATGTTG AACAAGCTGC TGGCTTGCTT CGCCTTCATT TTCATGATTG CTTCGTCCAG GGGTGCGATT CATCAGTGCT GCTGGTGGGA TCAGCAAGCG GACCGGGAGA GCAGGCTGCG  CCGCCTAACT TGACTCTCCG TCAGCAGGCT TTCAGGATCA TCGATGACCT CCGGAGGCGC GTGCATAGTA GATGTGGGAG AATTGTTTCT TGCTCTGACA TACTTGCTCT CGCTGCCCGC  GACTCTGTTT TTCTGACAGG AGGTCCGGAT TATGATATTC CATTGGGAAG AAGAGATGGG CTTAACTTTG CAACAAGGGC AGACACAATA GCAAACCTTC CACCACCAAC AAGCAACACA  AGTGCCCTCC TAACTTCACT CGCAACCAAG AATTTCAATG CCACAGATGT TGTAGCACTC TCAGGTGGCC ACACAATTGG TATAGGCCAT TGCCCTTCTT TCGACGAAAG AATCTATCCA  AACATAGATC CAACAATGGA CCAAACATTT GCAAGAAACC TAAGAATAAC ATGTCCAACA CCAGATTCAA ATAATAGGAC ATTTTTGGAC ATTAGATCAC CAAACGTATT TGATAATAGG  TACTATGTTG ATCTAATGAA CAGACAAGGA CTTTTCACTT CTGACCAAGA TTTGTACACA GATAGAAGAA CAAGAGGTAT TGTTACTGAT TTTGCTATTA ATCAAACCTT GTTTTTCGAA  AAGTTTGTTT ATGCAATGAT AAAGATGAGT CAATTGAATG TGTTAACGGG GAATCAAGGT GAAATTAGAT CCAATTGTTC ACTTCGAAAT GCTGCTGCCA TGGGACGTTC TTCTTCCAGC  TTATTGGGAT CGGTTGTGGA AGAGGCTGCT GAAATTGGCT TGTCTATGTT TTAATTAAGG ATAATGCTGT TGTAATCATA CTACTTTTCA ATTAGTTCTT GATGAGTTTA TTATGCGTAT  TCATGAGTTC TGCTCCAATA AAAAAACTCC AAGAACTATA CTTAATAAAG TCAATCCTGT TTTATTTTTT TTATATTCCT ACTTTTTTCA TGTCAGAATT TTAAAATTAA TGCCACTTGT 
AATAAGTTTT TTTTTAGTTA TACCATTTTA TAAAAGTCGA GAATTCAATG AAAAAAAAAA AAAAAAAA 

Retrieve as FASTA