Entry information : LsaPrx15
Entry ID 3456
Creation 2006-09-02 (Christophe Dunand)
Last sequence changes 2006-09-02 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-03-31 (Christophe Dunand)
Peroxidase information: LsaPrx15
Name LsaPrx15
Class Class III peroxidase     [Orthogroup: Prx015]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx15
start..stop
S start..stop
LvPrx15 637 0 1..328 1..328
LperPrx15 582 0 1..313 1..315
HaPrx36 562 0 1..328 1..327
AanPrx01 544 0 1..328 1..328
Literature and cross-references LsaPrx15
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and McHale,L. Lettuce (Lactuca sativa) ESTs (set 3) from the Compositae Genome
EST ref. GenBank:   DY976491 [5' end]   DW126394 [3' end]
Protein sequence: LsaPrx15
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   328 (304)
PWM (Da):   %s   34020.19 (31479.8)  
PI (pH):   %s   9.3 (9.27) Peptide Signal:   %s   cut: 25 range:25-328
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MGRVILIQIL SPSCLLIFSN LASAQLKQNY YATICPNVET IVRNAVRAKV QQTFVTIPGT LRLFFHDCFV QGCDASVMIA SSGSNKAEKD HPDNLSLAGD GFDTVIKAKA AIDAVPNCRN  KVSCADILTM ATRDVVALAG GPSYPVELGR LDGLSSTAAS VTGKLPKPNL NLNQLNSMFS AKGLTQNDMI ALSGAHTLGF SHCDQFSNRI YNFSRVNPVD PTLSPSYATQ LQQQCPKNVD 
PRIAINMDPN TPRTFDNVYY KNLxxxxxxx xxxxxLFSDS RSRSTVNTWA SSSKAFNDAF VAAMGKLGRV GVKTGRSGNI RRDCSAFN 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs: DY976491, DW126394. Probable frame shift for the PS (MGRVILIQ). No overlap between the two clones but compile based on the homology with LperPrx15. Cultivar="Salinas".