Entry information : LsaDiOx01
Entry ID 3458
Creation 2006-10-31 (Christophe Dunand)
Last sequence changes 2006-10-31 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2007-09-10 (Gregory Theiler)
Peroxidase information: LsaDiOx01
Name LsaDiOx01
Class Alpha-dioxygenase     [Orthogroup: DiOx001]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaDiOx01
start..stop
S start..stop
HaDiOx06 892 0 1..542 1..534
HaDiOx04 889 0 1..542 1..534
HaDiOx05 844 0 1..542 1..520
CclDiOx02 823 0 16..542 4..530
Literature and cross-references LsaDiOx01
Literature Kozik,A., Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L.,
Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S., Livingston,K., Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
Cluster/Prediction ref. UniGene:   Lsa.1106
Protein sequence: LsaDiOx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   542
PWM (Da):   %s   61573.91  
PI (pH):   %s   9.27
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MIPFMSSAKS HLLSPIKNLL LSSLRKFIHK DFHESFGEMT LTDKVLFLNV HGVDKSGIGW HRLPVFLGLS YLAIRRRLHD KYNLVNVGKT PVGVRFNAAD FPFRTADGKF TDPFNEGAGG  EGSFFGRNMP PVDQKDKLLK PDPMVVATKL LARKQFIDTG KQFNMIAASW IQFMIHDWIN HLESTQQIEL NAPREVVGQC PxKSFKFYKT KEFDTGLSDI KKGHHNTRTP WWDGSVIYGN  NLRELWQVRT FKDGKLKIAK DGLLQHDNNG LAIAGDIRNN WIGVSTLQAL FIQEHNAICD TLKKEYHDLD DEHLYRHARL VTSAVIAKIH TIDWTIELLK TDTLAAAMRI NWHGVLGKRF  KETVGHVGGA VLGGLVGLKK PNNHGVPYSL TEEFTSVYRM HSLLPDQLFI RDVNSKLGPN KSPRLSKKVD MINLIGKNGE TELSEIGFIT QMVSMGHQAC GALELWNYPM WLRDIVPQNM 
DGTDRVDHVD LPSLEIYRDR ERNVARYNEF RRSLLLIPIS KWENLTDDIE AIDTLREVYH DD 

Retrieve as FASTA  
Remarks Partial sequence from 5 ESTs + BQ865753 (5'end, frame shift and short overlap with the unigene). 3'end is missing.