Entry information : LsaPrx34
Entry ID 3472
Creation 2006-08-13 (Christophe Dunand)
Last sequence changes 2006-08-13 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsaPrx34
Name LsaPrx34
Class Class III peroxidase     [Orthogroup: Prx008]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation Apoplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx34
start..stop
S start..stop
LsePrx34 579 0 1..288 1..288
LsPrx34 565 0 1..289 1..287
LvPrx34 547 0 1..292 1..290
LperPrx34 494 5e-179 1..291 1..292
Literature and cross-references LsaPrx34
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and McHale,L. Lettuce (Lactuca sativa) ESTs (set 3) from the Compositae Genome
EST ref. GenBank:   DY984752 [5' end]
Protein sequence: LsaPrx34
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   292 (266)
PWM (Da):   %s   30999.77 (28314.5)  
PI (pH):   %s   9.12 (9.30) Peptide Signal:   %s   cut: 27 range:27-292
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MATSSMIISF ALLALCLMIN TNTSSAQLSP DFYSKSCPKV FKVVSSVIQS AVSKEKRMGA SLLRLHFHDC FVNGCDGSIL LDDTPSFTGE KTAGPNNNSV RGFNVIDDVK SKVEKVCPGV  VSCADILTIS ALESVLALGG PSWKVKLGRR DSKSASLAAA NSGVIPPPES TLSNLINRFQ AVGLSTKDMV ALSGAHTIGQ ARCTIFRARV HNDTNIDASF AKSRQSNCPL PVxSGDNNLA 
PLDVKTPNNF DNTYYKNLIN QQGLLRSDQQ LHNGGFTDSL VGQYSKKPGK FQ 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs (DY981233 and DY984752). Short 3'end is missing.