Entry information : LsaPrx38
Entry ID 3476
Creation 2006-08-13 (Christophe Dunand)
Last sequence changes 2006-08-13 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-24 (Christophe Dunand)
Peroxidase information: LsaPrx38
Name LsaPrx38
Class Class III peroxidase     [Orthogroup: Prx022]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca sativa (Lettuce)    [TaxId: 4236 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsaPrx38
start..stop
S start..stop
NtPrx36-1A 410 2e-145 1..290 5..295
CroPrx12 409 6e-145 8..290 15..298
RcPrx31 408 2e-144 8..290 13..303
MguPrx96 406 8e-144 26..290 40..304
Literature and cross-references LsaPrx38
Literature Michelmore,R.W., Knapp,S., Rieseberg,L., Bradford,K., Kesseli,R., Boore,J., Kozik,A., Matvienko,M., Lavelle,D. and McHale,L. Lettuce (Lactuca sativa) ESTs (set 3) from the Compositae Genome
EST ref. GenBank:   DY978784 [5' end]
Protein sequence: LsaPrx38
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   290 (269)
PWM (Da):   %s   31317.69 (29037.4) Transmb domain:   %s   i7-29o
PI (pH):   %s   6.5 (5.73) Peptide Signal:   %s   cut: 22 range:22-290
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MHQKNTIIFL LVSLSSLLAN GQLDYYYYSS CPNLPMIVRY GVWAAMKNDT RIAASLLRLH FHDCFVNGCD GSVLLDDTKT FKGEKKAGPN RNSVRGFDVI DNIKADVERA CPSTVSCVDI  LTLAAREAVF LSGGPNWAVA LGRRDGVTAN LKAANENLPT PFEPLANIPA KFAVVGLDLR DVVALSGAHT IGLAQCFTFK NRLFNFKGTG QPDPNLDSSL ASSLKTSCPN VDKSNTNLNS 
LDMVTTYQFD NAYYKNLVNN GGLLESDxAL MGDPQSAAIV NDYSMYPYLF 

Retrieve as FASTA  
Remarks Partial sequence from 2 EST (DY978784 and DY980065). 12 aa diverged between the 2 sequences but the 5'UTR is identical. The first accession has been used as reference. 3' end is missing.