Entry information : LsePrx04
Entry ID 3507
Creation 2006-08-16 (Christophe Dunand)
Last sequence changes 2006-08-16 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LsePrx04
Name LsePrx04
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca serriola    [TaxId: 75943 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LsePrx04
start..stop
S start..stop
LsaPrx04 536 0 1..273 2..274
HaPrx35 489 1e-176 1..273 26..298
CcarPrx02 480 7e-173 1..273 24..296
CcarPrx01 477 6e-172 1..273 24..296
Literature and cross-references LsePrx04
Literature Kozik,A.,Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S.,Livingston,K, Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
mRNA ref. GenBank:   DW117343 [Fragment]
Protein sequence: LsePrx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   273
PWM (Da):   %s   29730.8  
PI (pH):   %s   7.78
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
RASEAQTPAP APGLSYTFYR TTCPQLESIV RTQLQTVFNS DIGQAAGLLR LHFHDCFVQG CDGSVLLDGS ASGPSQKDAP PNLSLRAQAF VILENLRRLV HNACNRTVSC SDPTAHAARE  AEFLSGGPNY RIPLGRRDGT TFATRNATLA NLPPPTANTP TILNSLSTKG FTPTDVVALS GGHTIGIAHC TSFIPRLFPT RDPTMDQTFF NNLRLTCPTN VTDNTTFMDI RSPNVFDNRY 
YVDLMNRQGL FTSDQDLYTD SRTRGIVTNY AIN 

Retrieve as FASTA  
Remarks Partial sequence from 3 ESTs: DW117343, DW120646 (5'and frame shift), BU008110. No ATG and 3'end is missing.