Entry information : LperPrx04
Entry ID 3508
Creation 2006-09-02 (Christophe Dunand)
Last sequence changes 2006-09-02 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-06-16 (Christophe Dunand)
Peroxidase information: LperPrx04
Name LperPrx04
Class Class III peroxidase     [Orthogroup: Prx007]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca perennis    [TaxId: 43195 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LperPrx04
start..stop
S start..stop
ToPrx04 454 5e-165 9..239 13..243
LsaPrx04 448 6e-162 17..239 1..223
LsePrx04 427 6e-154 18..239 1..222
HaPrx35 422 2e-150 9..236 16..244
Literature and cross-references LperPrx04
Literature Kozik,A.,Michelmore,R.W., Knapp,S., Matvienko,M., Rieseberg,L., Lin,H., van Damme,M., Lavelle,D., Chevalier,P., Ziegle,J., Ellison ,P., Kolkman,J., Slabaugh,M.S.,Livingston,K, Zhou,Y., Lai,Z., Church,S., Jackson,L. and Bradford,K. Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   DW159437 [5' end]
Protein sequence: LperPrx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   239 (217)
PWM (Da):   %s   25654.95 (23134.7)  
PI (pH):   %s   7.77 (8.06) Peptide Signal:   %s   cut: 23 range:23-239
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
EHHAYQHSLF ILLSCNLRAS EAQTPAPAPG LSYTFYRTTC PQLESIVRTQ LQTVFNSDIG QAAGLLRLHF HDCFVQGCDG SVLLDGSASG PSEKDAPPNL SLRAQAFVII ENLRRLVHNA 
CNRIVSCSDL TALAARDAVF LSGGPNYSIP LGRRDGTTFA TRNVTLANLP PPTANTTTIL NSLSTKGFTP TDVVALSGGH TIGIAHCTSF TPRLFPTRDP TMDQTFFNNL RLTCPTNVT 

Retrieve as FASTA  
Remarks Partial sequence from 3 ESTs: DW159437, DW165901, DW087126 (short and bad quality). Non ATG and 3'end is missing. Strain="UK-1".