Entry information : LperPrx07
Entry ID 3516
Creation 2006-08-17 (Christophe Dunand)
Last sequence changes 2016-02-05 (Christophe Dunand)
Sequence status partial
Reviewer Achraf Jemmat
Last annotation changes 2016-02-05 (Achraf Jemmat)
Peroxidase information: LperPrx07
Name LperPrx07
Class Class III peroxidase     [Orthogroup: Prx032]*
Taxonomy Eukaryota Viridiplantae Streptophyta Asteraceae Lactuca
Organism Lactuca perennis    [TaxId: 43195 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LperPrx07
start..stop
S start..stop
LsPrx07 541 0 1..271 1..272
CiPrx06 506 0 2..256 1..255
LsaPrx07 427 2e-154 1..217 1..217
CePrx01 372 3e-132 29..249 1..221
Literature and cross-references LperPrx07
Literature Kozik,A.,et al., Lettuce and Sunflower ESTs from the Compositae Genome Project
EST ref. GenBank:   DW099466 [5' end]
Protein sequence: LperPrx07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   271 (244)
PWM (Da):   %s   29438.95 (26669.5) Transmb domain:   %s   i7-29o
PI (pH):   %s   7.76 (7.76) Peptide Signal:   %s   cut: 28 range:28-271
Sequence
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Send to Peroxiscan
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MMREQGLVIL SILALVALGM MVGGSQAAIG MPPESAPLIR HFYKVHNTCA NVEPFVRHQV QLIWANDKTV APKLIKLLYA DCMVNGCDAS ILLDGPNTEK TSPKARGLAA FVLIDKIKQV  LEARCPGAVS CADILNIAAR DAVYLSGGPS YPVFLGRRDG LESNAAWIDF PSPSMSWEST LAYFESKGLD LQDMVTLLGA HMMGRVRCSN ILDRLYNFNN TGKPDPSMEP STLTYLRAEC 
PPKVKLGQPN PLINLNxNPT HSFTNSYYSR V 

Retrieve as FASTA  
Remarks Partial sequence from 2 ESTs (DW099466 and DW077084). 3'end is missing and frame shift. Containing motif 'YADC'.
CDS
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ATGATGAGAG AACAAGGGTT GGTGATTCTT TCCATTCTTG CATTGGTTGC ATTAGGTATG ATGGTTGGCG GCAGCCAGGC GGCAATAGGG ATGCCACCTG AGTCGGCACC ATTAATTCGC  CATTTTTATA AAGTGCACAA TACGTGTGCG AACGTGGAGC CATTTGTTCG ACACCAAGTG CAGCTTATAT GGGCTAATGA TAAGACTGTT GCTCCAAAGC TCATCAAGTT GCTCTATGCT  GATTGCATGG TCAATGGTTG CGATGCATCC ATTCTACTAG ATGGCCCAAA TACAGAGAAA ACATCACCAA AAGCCAGAGG ACTAGCAGCA TTCGTGCTTA TCGATAAAAT CAAGCAAGTC  TTGGAAGCAC GGTGCCCAGG AGCAGTCTCG TGTGCTGACA TTCTCAATAT TGCAGCTAGA GATGCCGTGT ATTTGTCGGG CGGGCCATCG TATCCGGTTT TCTTAGGAAG AAGGGACGGA  CTTGAATCAA ATGCAGCATG GATAGACTTC CCCTCGCCTT CCATGTCTTG GGAATCGACT TTGGCATATT TTGAATCTAA AGGCTTGGAT TTGCAAGATA TGGTTACTCT CCTAGGAGCA  CATATGATGG GCCGAGTTAG ATGCAGTAAC ATTCTCGACC GCCTCTACAA TTTCAACAAC ACCGGAAAAC CCGACCCAAG TATGGAACCA TCTACACTAA CTTACTTGCG AGCCGAATGC 
CCACCGAAAG TCAAACTCGG TCAACCCAAC CCGCTCATAA ACTTAAACnn nAACCCGACC CACAGTTTCA CCAACTCCTA CTATTCTCGA GTG 

Retrieve as FASTA  
cDNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CTATCAACCT TTGCAATTGA GATTAATACA AAGATGATGA GAGAACAAGG GTTGGTGATT CTTTCCATTC TTGCATTGGT TGCATTAGGT ATGATGGTTG GCGGCAGCCA GGCGGCAATA  GGGATGCCAC CTGAGTCGGC ACCATTAATT CGCCATTTTT ATAAAGTGCA CAATACGTGT GCGAACGTGG AGCCATTTGT TCGACACCAA GTGCAGCTTA TATGGGCTAA TGATAAGACT  GTTGCTCCAA AGCTCATCAA GTTGCTCTAT GCTGATTGCA TGGTCAATGG TTGCGATGCA TCCATTCTAC TAGATGGCCC AAATACAGAG AAAACATCAC CAAAAGCCAG AGGACTAGCA  GCATTCGTGC TTATCGATAA AATCAAGCAA GTCTTGGAAG CACGGTGCCC AGGAGCAGTC TCGTGTGCTG ACATTCTCAA TATTGCAGCT AGAGATGCCG TGTATTTGTC GGGCGGGCCA  TCGTATCCGG TTTTCTTAGG AAGAAGGGAC GGACTTGAAT CAAATGCAGC ATGGATAGAC TTCCCCTCGC CTTCCATGTC TTGGGAATCG ACTTTGGCAT ATTTTGAATC TAAAGGCTTG  GATTTGCAAG ATATGGTTAC TCTCCTAGGA GCACATATGA TGGGCCGAGT TAGATGCAGT AACATTCTCG ACCGCCTCTA CAATTTCAAC AACACCGGAA AACCCGACCC AAGTATGGAA  CCATCTACAC TAACTTACTT GCGAGCCGAA TGCCCACCGA AAGTCAAACT CGGTCAACCC AACCCGCTCA TAAACTTAAA CnnnAACCCG ACCCACAGTT TCACCAACTC CTACTATTCT 
CGAGTG 

Retrieve as FASTA