Entry information : CroPrx02(CRO_T005442 / CrInt1 / cra_locus_2082_iso_1_len_327_ver_3)
Entry ID 3521
Creation 2008-06-19 (Christophe Dunand)
Last sequence changes 2008-06-19 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2020-04-05 (Christophe Dunand)
Peroxidase information: CroPrx02(CRO_T005442 / CrInt1 / cra_locus_2082_iso_1_len_327_ver_3)
Name CroPrx02(CRO_T005442 / CrInt1 / cra_locus_2082_iso_1_len_327_ver_3)
Class Class III peroxidase    [Orthogroup: Prx002]
Taxonomy Eukaryota Viridiplantae Streptophyta Apocynaceae Catharanthus
Organism Catharanthus roseus    [TaxId: 4058 ]
Cellular localisation N/D
Tissue type Stems
Inducer UV irradiation
Repressor N/D
Best BLASTp hits
Perox score E-value CroPrx02
start..stop
S start..stop
AmPrx01 612 0 3..330 7..331
NtPrx60-1B 605 0 1..330 1..326
InPrx01 606 0 1..330 3..331
LePrx17 601 0 1..330 1..326
Literature and cross-references CroPrx02(CRO_T005442 / CrInt1 / cra_locus_2082_iso_1_len_327_ver_3)
Literature Sen J., Sinha A.K., Kumar S. Putative secretary peroxidases cDNA from Catharanthus roaeus.
Protein ref. UniProtKB:   Q3L0W8
mRNA ref. GenBank:   AY769111 [Fragment]
EST ref. GenBank:   FD424155.1 [5' end]   FD425226.1 [3' end]
Protein sequence: CroPrx02(CRO_T005442 / CrInt1 / cra_locus_2082_iso_1_len_327_ver_3)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   330 (309)
PWM (Da):   %s   37300.28 (35025.1)  
PI (pH):   %s   8.55 (8.39) Peptide Signal:   %s   cut: 22 range:22-330
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MASKTLFFLV ILSFSALSTF AENEAEADPG LVMNYYKDSC PQAEDIIREQ VKLLYKRHKN TAFSWLRNIF HDCFVESCDA SLLLDSTRRV LSEKETDRSF GMRNFRYLED IKEALERECP  GVVSCADILV LSARDGIVSL GGPFIPLKTG RRDGRRSRAE ILEQHLPDHN ESLTVVLERF GSIGINTPGL VALLGAHSVG RTHCVKLVHR LYPEVDPAFP ESHVQHMLKK CPDPIPDPKA 
VQYVRNDRGT PMKLDNNYYR NILDNKGLLL VDHQLATDKR TKPFVKKMAK SQDYFFKEFA RAITILSENN PLTGTKGEIR KQCNVANKLH 

Retrieve as FASTA  
Remarks Complete sequence from genomic and 35 ESTs.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCCA AAACTCTCTT CTTCCTTGTC ATTCTCTCCT TCTCTGCTCT CTCAACTTTT GCTGAAAATG AAGCCGAGGC AGACCCTGGT CTTGTAATGA ACTATTACAA GGATTCATGT  CCTCAAGCTG AAGATATCAT CAGGGAACAA GTCAAACTTC TTTACAAACG TCACAAGAAC ACCGCTTTCT CTTGGCTAAG GAACATTTTC CATGATTGCT TTGTCGAAGT AAGTACTAAG  TACCCAACTT CATACAAATT CTGATACTGA CTTTATACTA AGAAAGATTG TAACTTTGCA TGTTGATGAT GATTTCTTGG CAGTCTTGTG ATGCTTCATT GTTGCTGGAC TCAACTAGAA  GAGTCCTGTC TGAGAAGGAA ACAGATAGGA GTTTTGGAAT GAGGAATTTC AGATACCTTG AAGACATCAA AGAAGCCCTT GAAAGGGAGT GTCCTGGAGT TGTTTCTTGT GCTGATATTC  TTGTTTTGTC TGCAAGAGAT GGCATTGTTT CGGTAAATTT TTTTATCTTT CCTTTTCTGT AGAAATTCCT AAGTTTTGCC TCTGTTTTAC TTTGGATCTG TTTAGTTTAT TTTATACTAA  ATAATTACCC TTTCTGTAGC AACTATTTTT GGATAAAAAA CTGCTATGGT TTAGTGGGTA GTAGTACTAA TAATTGAGAT CTGGGCGTAA ATCAGTTGAT TATGGGATGG CATTGTTGGT  TCTGGTGGTG GGACAGTAGT GTAGGTACGA AGGTCGTTCA AGATGGATTT TCACTCCTTC GGAGTGCTTC TTATAGACAC CAGGCAAAGG AGCTTTAGTC TAACGGCAGC CACCGCTGTG  TTAGCATGAT TTGCATTCTT CGGTAACCTA TCCGGCTGGG GATGGGGCTT CCAATAATTG AGATTCTTGC ATAATTGAGG CTCTGTTTTG GTAAATTTTT TGCAGTTAGG AGGGCCATTT  ATCCCTCTTA AAACCGGAAG AAGAGATGGC AGGAGAAGCA GAGCAGAGAT ACTGGAGCAA CATCTCCCAG ACCACAATGA GAGCCTCACT GTTGTTCTTG AGAGGTTTGG ATCTATTGGC  ATCAATACCC CTGGCTTGGT TGCCTTGCTA GGTACAGTCC CATTCCATTC TCCAGATTTT AGTCAGAGTG ATTGTTTTGT TCTGTTGATT AATATGTTAA AATTAACAGG TGCTCATAGT  GTTGGGAGAA CCCACTGTGT GAAGCTGGTT CATCGTTTAT ATCCAGAGGT GGATCCTGCA TTTCCAGAGA GCCATGTTCA GCACATGTTA AAGAAGTGCC CTGATCCAAT TCCTGATCCA  AAGGCAGTAC AATATGTAAG AAATGACAGA GGAACACCTA TGAAATTAGA CAACAATTAT TACAGAAACA TCTTGGACAA CAAGGGCTTG TTGCTAGTTG ATCACCAATT AGCCACAGAC  AAAAGAACAA AACCATTTGT CAAGAAAATG GCAAAAAGCC AAGATTACTT CTTTAAGGAA TTTGCAAGAG CCATTACTAT TCTGTCTGAA AATAACCCTC TTACTGGTAC TAAAGGTGAG 
ATTAGAAAGC AGTGTAATGT AGCTAATAAG TTACATTAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTCCA AAACTCTCTT CTTCCTTGTC ATTCTCTCCT TCTCTGCTCT CTCAACTTTT GCTGAAAATG AAGCCGAGGC AGACCCTGGT CTTGTAATGA ACTATTACAA GGATTCATGT  CCTCAAGCTG AAGATATCAT CAGGGAACAA GTCAAACTTC TTTACAAACG TCACAAGAAC ACCGCTTTCT CTTGGCTAAG GAACATTTTC CATGATTGCT TTGTCGAATC TTGTGATGCT  TCATTGTTGC TGGACTCAAC TAGAAGAGTC CTGTCTGAGA AGGAAACAGA TAGGAGTTTT GGAATGAGGA ATTTCAGATA CCTTGAAGAC ATCAAAGAAG CCCTTGAAAG GGAGTGTCCT  GGAGTTGTTT CTTGTGCTGA TATTCTTGTT TTGTCTGCAA GAGATGGCAT TGTTTCGTTA GGAGGGCCAT TTATCCCTCT TAAAACCGGA AGAAGAGATG GCAGGAGAAG CAGAGCAGAG  ATACTGGAGC AACATCTCCC AGACCACAAT GAGAGCCTCA CTGTTGTTCT TGAGAGGTTT GGATCTATTG GCATCAATAC CCCTGGCTTG GTTGCCTTGC TAGGTGCTCA TAGTGTTGGG  AGAACCCACT GTGTGAAGCT GGTTCATCGT TTATATCCAG AGGTGGATCC TGCATTTCCA GAGAGCCATG TTCAGCACAT GTTAAAGAAG TGCCCTGATC CAATTCCTGA TCCAAAGGCA  GTACAATATG TAAGAAATGA CAGAGGAACA CCTATGAAAT TAGACAACAA TTATTACAGA AACATCTTGG ACAACAAGGG CTTGTTGCTA GTTGATCACC AATTAGCCAC AGACAAAAGA  ACAAAACCAT TTGTCAAGAA AATGGCAAAA AGCCAAGATT ACTTCTTTAA GGAATTTGCA AGAGCCATTA CTATTCTGTC TGAAAATAAC CCTCTTACTG GTACTAAAGG TGAGATTAGA 
AAGCAGTGTA ATGTAGCTAA TAAGTTACAT TAG 

Retrieve as FASTA