Entry information : SamCP01_SB2B
Entry ID 3598
Creation 2006-08-23 (Filippo Passardi)
Last sequence changes 2006-08-23 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2010-03-17 (Christophe Dunand)
Peroxidase information: SamCP01_SB2B
Name SamCP01_SB2B
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Gammaproteobacteria Shewanellaceae Shewanella
Organism Shewanella amazonensis    [TaxId: 60478 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SamCP01_SB2B
start..stop
S start..stop
SHspCP02_ANA-3 1232 0 2..738 3..739
SHspCP01_MR-4 1222 0 2..738 3..739
SHspCP01_MR-7 1213 0 2..738 3..739
SonCP01 1179 0 4..738 5..741
Literature and cross-references SamCP01_SB2B
Literature Copeland,A., Lucas,S., Lapidus,A., Barry,K., Detter,C., Glavina,T., Hammon,N., Israni,S., Pitluck,S. and Richardson,P. CONSRTM US DOE Joint Genome Institute (JGI-PGF). Complete sequence of Shewanella amazonensis SB2B.
Protein ref. UniProtKB:   A1S3J7
DNA ref. GenBank:   CP000507.1 (918123..915907)
Protein sequence: SamCP01_SB2B
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   738 (712)
PWM (Da):   %s   80628.63 (78003.2)  
PI (pH):   %s   6.63 (6.42) Peptide Signal:   %s   cut: 27 range:27-738
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKRTLPTLSA LALSMSLALA AGQTQAAETT TNSYWWPEQL DLSPLRQHGS ESNPYGADYD YAKAFGSLDL VAVKADIKTV LTTSQDWWPA DYGHYGPFFI RMAWHSAGVY RIFDGRGGAS  GGQQRFEPLN SWPDNVNLDK ARRLLWPIKQ KYGSKISWAD LMVLAGNVSL ESMGFKTFGF AGGRTDDWEA ERVDWGHEKK WLDNKRHNEK GELAKPLGAT QMGLIYVNPE GPNGVPDPLA  AARDIRETFG RMAMNDEETV ALIAGGHTFG KAHGAHDPAK CVGADPAAAG VEAQGLGWKN KCGKGHSEDT VTSGLEGAWS VSPTQWTMQY LDNLYGFEWV QSKSPAGHIQ WIPANGAGDN  LVPDAHVAGK RHAPIMFTTD IALKEDPSYR EITSRFRKDP KAFELAFAKA WFKLTHRDMG PKTRYLGSDV PAEALIWQDP IPALDHAVID TNDIAALKSA ILASGIAVPE LVRTAWASAA  SFRGTDMRGG ANGARLRLEP QRSWEVNNPE ELAKVLPKLE KIQKDFNKSL KGGKKVSLAD VIVLAGGTAI EQAARSAGYS VTVPFTPGRM DATTAQTDVS SFAVLEPKAD AFRNFFSEES  YLPPAEALVE KATQLTLSVP EMTALVGGLR VLDANSNKAK HGVFTDKPGN LSNDFFVNLL DMSTRWEKSP REAGLYQGFD RQSGKLRWTA TPVDLIFGSH AELRAVAEVY GANDGKDRFV 
EDFIAAWTKV MNLDRFDI 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="ATCC BAA-1098 / SB2B".