Entry information : RpCP01_BisB5
Entry ID 3609
Creation 2006-08-23 (Filippo Passardi)
Last sequence changes 2016-01-06 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-06 (Christophe Dunand)
Peroxidase information: RpCP01_BisB5
Name RpCP01_BisB5
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Bradyrhizobiaceae Rhodopseudomonas
Organism Rhodopseudomonas palustris    [TaxId: 1076 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RpCP01_BisB5
start..stop
S start..stop
RpCP01_HaA2 1341 0 1..732 1..732
RpCP01_CGA009 1241 0 1..732 1..732
RpCP01_BisA53 1191 0 1..730 1..729
MnoCP01 1189 0 1..732 1..729
Literature and cross-references RpCP01_BisB5
Literature Copeland,A et al., CONSRTM US DOE Joint Genome Institute (JGI-PGF). Sequencing of the draft genome and assembly of Rhodopseudomonas palustris BisB5. Unpublished
DNA sequence http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=77653513&itemID=115&view=gbwithparts
Other sequence link http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=EAO85433.1
Protein ref. GenBank:   EAO85433.1 UniProtKB_Uniparc:   Q37HU4
DNA ref. GenBank:   AAKZ01000007.1
Protein sequence: RpCP01_BisB5
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   732
PWM (Da):   %s   80442.11  
PI (pH):   %s   5.37
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDAKTDDQGG KCPFPHGGGS RGHRNRDWWP EQLDINMLHR NSTLSDPLGK AFDYAKEFES LDLDAVIKDL HALMTDSQDW WPADFGHYGG LMIRMAWHSA GTYRTTDGRG GAGAGQQRFA  PLNSWPDNAN LDKARRLLWP IKQKYGNKIS WADLYVLTGN VALESMGFKT FGFAGGRADT WEPEELFWGP EGSWLGDERY SGERQLHDAL GAVQMGLIYV NPEGPNGNPD PVAAAKDIRE  TFARMAMNDE ETVALIAGGH TFGKTHGAGD PSLIGAEPEG GALEDQGLGW KSKFGTGFGA DAITGGPEVI WTQTPTQWSN FFFENLFGFE WELDKSPAGA KQWKAKGAEA TVPDPFDPTK  KRVPTMLTTD LSLRFDPAYE KISRRFFENP DQFADAFARA WFKLTHRDMG PKVRYRGKLV PKEDLIWQDP IPPVDHELVS AKDIADLKAR ILASGLSVSQ LVSTAFASAS TYRHSDKRGG  ANGARIRFAP QKDWEVNQPA DLAQVLGKLE AIQKAFNDAQ SGGKKVSLAD LIVLGGSAAV EKAAKDAGTE VEVPFTPGRM DALEEQTDGD SFKVLEPRAD GFRNFIGKRH QFMQPEEALV  DRAQLLNLTA PEMTVLLGGL RVLGGNVGHD SHGVFTDRPE KLTNDFFVNL LDMKTAWSLS ATAEGVYEGR DRKTGDLRWT GTRVDLIFGS HSQLRALAEV YGQSDAQTKF AQDFVAAWTK 
VMNADRFDLA AK 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCAA AGACAGACGA TCAGGGCGGC AAGTGCCCGT TTCCGCACGG CGGCGGCTCG CGGGGGCACA GGAATCGCGA CTGGTGGCCG GAGCAGCTCG ACATCAACAT GCTCCATCGT  AATTCGACCC TGTCCGACCC GCTGGGCAAG GCGTTCGACT ACGCCAAGGA ATTCGAAAGC CTCGATCTCG ACGCGGTGAT CAAGGATCTG CACGCGCTGA TGACCGATTC GCAGGACTGG  TGGCCGGCGG ATTTCGGCCA CTACGGCGGT CTGATGATCC GCATGGCCTG GCATTCGGCC GGCACCTATC GCACCACCGA CGGCCGCGGC GGCGCCGGCG CCGGACAGCA GCGCTTCGCG  CCGCTGAACT CGTGGCCGGA CAACGCCAAT CTCGACAAGG CGCGCCGGCT GCTGTGGCCG ATCAAGCAGA AATACGGCAA CAAGATCTCG TGGGCCGATC TCTACGTGCT GACCGGCAAC  GTCGCGCTGG AATCGATGGG CTTCAAGACC TTCGGCTTCG CCGGCGGCCG TGCCGACACC TGGGAGCCCG AAGAGCTGTT CTGGGGTCCG GAAGGCTCCT GGCTCGGCGA TGAGCGCTAT  TCCGGCGAGC GCCAGCTGCA CGACGCGCTC GGCGCGGTGC AGATGGGCCT GATCTACGTC AACCCGGAAG GCCCGAACGG CAATCCTGAT CCGGTCGCCG CCGCCAAGGA CATCCGCGAG  ACCTTCGCCC GGATGGCGAT GAACGACGAA GAGACCGTGG CGCTGATCGC CGGCGGCCAC ACCTTCGGCA AGACCCACGG CGCCGGCGAT CCGTCGCTGA TCGGCGCGGA GCCGGAGGGC  GGGGCACTCG AGGATCAGGG CCTCGGCTGG AAGAGCAAGT TCGGCACCGG CTTCGGCGCC GACGCCATCA CCGGCGGGCC GGAAGTGATC TGGACGCAGA CGCCGACGCA GTGGAGCAAC  TTCTTCTTCG AAAACCTGTT CGGCTTCGAA TGGGAACTCG ACAAGAGCCC GGCCGGCGCC AAGCAGTGGA AGGCCAAGGG CGCCGAGGCG ACCGTGCCGG ATCCGTTCGA TCCGACCAAG  AAGCGCGTGC CGACGATGCT GACGACCGAC CTGTCGCTGC GCTTCGACCC CGCCTACGAG AAGATCTCGC GCCGCTTTTT CGAGAACCCG GATCAGTTCG CCGACGCCTT CGCCCGCGCC  TGGTTCAAGC TGACCCACCG CGACATGGGC CCGAAGGTGC GCTATCGCGG CAAGCTGGTG CCGAAGGAAG ATCTGATCTG GCAGGACCCG ATCCCGCCGG TCGACCACGA GCTGGTCAGC  GCCAAGGACA TCGCCGATCT CAAGGCGCGG ATCCTCGCCT CCGGCCTGTC GGTGTCGCAG CTGGTCTCGA CCGCGTTCGC CTCGGCCTCG ACCTATCGCC ATTCCGACAA GCGCGGCGGC  GCCAACGGCG CGCGCATCCG CTTCGCGCCG CAGAAGGATT GGGAGGTCAA CCAGCCGGCC GATCTCGCCC AGGTGCTCGG CAAGCTCGAA GCGATCCAGA AGGCGTTCAA CGACGCGCAG  TCGGGCGGCA AGAAGGTCTC GCTCGCCGAC CTGATCGTGC TCGGCGGCTC AGCCGCGGTC GAGAAGGCCG CCAAGGATGC CGGCACCGAG GTCGAGGTGC CGTTCACCCC GGGCCGGATG  GACGCGCTGG AAGAGCAGAC CGACGGCGAT TCGTTCAAGG TGCTGGAGCC GCGGGCCGAC GGCTTCCGCA ACTTCATCGG CAAGCGGCAT CAGTTCATGC AGCCCGAAGA AGCGCTGGTC  GATCGCGCGC AGCTCCTCAA CCTGACTGCG CCGGAAATGA CGGTGCTGCT CGGCGGCCTG CGCGTGCTCG GCGGCAATGT CGGCCACGAC AGCCACGGCG TCTTCACCGA CCGGCCGGAG  AAGCTGACCA ACGACTTCTT CGTCAACCTC TTGGACATGA AGACCGCCTG GTCGCTCTCG GCCACCGCCG AAGGCGTCTA TGAAGGCCGC GACCGCAAGA CCGGCGACCT GCGCTGGACC  GGCACCCGCG TCGATCTGAT CTTCGGCTCG CACTCGCAGC TGCGCGCGCT CGCCGAAGTC TACGGTCAGT CCGACGCCCA GACGAAGTTC GCCCAGGACT TCGTCGCCGC CTGGACCAAG 
GTGATGAACG CGGATCGGTT CGACCTCGCG GCGAAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCAA AGACAGACGA TCAGGGCGGC AAGTGCCCGT TTCCGCACGG CGGCGGCTCG CGGGGGCACA GGAATCGCGA CTGGTGGCCG GAGCAGCTCG ACATCAACAT GCTCCATCGT  AATTCGACCC TGTCCGACCC GCTGGGCAAG GCGTTCGACT ACGCCAAGGA ATTCGAAAGC CTCGATCTCG ACGCGGTGAT CAAGGATCTG CACGCGCTGA TGACCGATTC GCAGGACTGG  TGGCCGGCGG ATTTCGGCCA CTACGGCGGT CTGATGATCC GCATGGCCTG GCATTCGGCC GGCACCTATC GCACCACCGA CGGCCGCGGC GGCGCCGGCG CCGGACAGCA GCGCTTCGCG  CCGCTGAACT CGTGGCCGGA CAACGCCAAT CTCGACAAGG CGCGCCGGCT GCTGTGGCCG ATCAAGCAGA AATACGGCAA CAAGATCTCG TGGGCCGATC TCTACGTGCT GACCGGCAAC  GTCGCGCTGG AATCGATGGG CTTCAAGACC TTCGGCTTCG CCGGCGGCCG TGCCGACACC TGGGAGCCCG AAGAGCTGTT CTGGGGTCCG GAAGGCTCCT GGCTCGGCGA TGAGCGCTAT  TCCGGCGAGC GCCAGCTGCA CGACGCGCTC GGCGCGGTGC AGATGGGCCT GATCTACGTC AACCCGGAAG GCCCGAACGG CAATCCTGAT CCGGTCGCCG CCGCCAAGGA CATCCGCGAG  ACCTTCGCCC GGATGGCGAT GAACGACGAA GAGACCGTGG CGCTGATCGC CGGCGGCCAC ACCTTCGGCA AGACCCACGG CGCCGGCGAT CCGTCGCTGA TCGGCGCGGA GCCGGAGGGC  GGGGCACTCG AGGATCAGGG CCTCGGCTGG AAGAGCAAGT TCGGCACCGG CTTCGGCGCC GACGCCATCA CCGGCGGGCC GGAAGTGATC TGGACGCAGA CGCCGACGCA GTGGAGCAAC  TTCTTCTTCG AAAACCTGTT CGGCTTCGAA TGGGAACTCG ACAAGAGCCC GGCCGGCGCC AAGCAGTGGA AGGCCAAGGG CGCCGAGGCG ACCGTGCCGG ATCCGTTCGA TCCGACCAAG  AAGCGCGTGC CGACGATGCT GACGACCGAC CTGTCGCTGC GCTTCGACCC CGCCTACGAG AAGATCTCGC GCCGCTTTTT CGAGAACCCG GATCAGTTCG CCGACGCCTT CGCCCGCGCC  TGGTTCAAGC TGACCCACCG CGACATGGGC CCGAAGGTGC GCTATCGCGG CAAGCTGGTG CCGAAGGAAG ATCTGATCTG GCAGGACCCG ATCCCGCCGG TCGACCACGA GCTGGTCAGC  GCCAAGGACA TCGCCGATCT CAAGGCGCGG ATCCTCGCCT CCGGCCTGTC GGTGTCGCAG CTGGTCTCGA CCGCGTTCGC CTCGGCCTCG ACCTATCGCC ATTCCGACAA GCGCGGCGGC  GCCAACGGCG CGCGCATCCG CTTCGCGCCG CAGAAGGATT GGGAGGTCAA CCAGCCGGCC GATCTCGCCC AGGTGCTCGG CAAGCTCGAA GCGATCCAGA AGGCGTTCAA CGACGCGCAG  TCGGGCGGCA AGAAGGTCTC GCTCGCCGAC CTGATCGTGC TCGGCGGCTC AGCCGCGGTC GAGAAGGCCG CCAAGGATGC CGGCACCGAG GTCGAGGTGC CGTTCACCCC GGGCCGGATG  GACGCGCTGG AAGAGCAGAC CGACGGCGAT TCGTTCAAGG TGCTGGAGCC GCGGGCCGAC GGCTTCCGCA ACTTCATCGG CAAGCGGCAT CAGTTCATGC AGCCCGAAGA AGCGCTGGTC  GATCGCGCGC AGCTCCTCAA CCTGACTGCG CCGGAAATGA CGGTGCTGCT CGGCGGCCTG CGCGTGCTCG GCGGCAATGT CGGCCACGAC AGCCACGGCG TCTTCACCGA CCGGCCGGAG  AAGCTGACCA ACGACTTCTT CGTCAACCTC TTGGACATGA AGACCGCCTG GTCGCTCTCG GCCACCGCCG AAGGCGTCTA TGAAGGCCGC GACCGCAAGA CCGGCGACCT GCGCTGGACC  GGCACCCGCG TCGATCTGAT CTTCGGCTCG CACTCGCAGC TGCGCGCGCT CGCCGAAGTC TACGGTCAGT CCGACGCCCA GACGAAGTTC GCCCAGGACT TCGTCGCCGC CTGGACCAAG 
GTGATGAACG CGGATCGGTT CGACCTCGCG GCGAAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCAA AGACAGACGA TCAGGGCGGC AAGTGCCCGT TTCCGCACGG CGGCGGCTCG CGGGGGCACA GGAATCGCGA CTGGTGGCCG GAGCAGCTCG ACATCAACAT GCTCCATCGT  AATTCGACCC TGTCCGACCC GCTGGGCAAG GCGTTCGACT ACGCCAAGGA ATTCGAAAGC CTCGATCTCG ACGCGGTGAT CAAGGATCTG CACGCGCTGA TGACCGATTC GCAGGACTGG  TGGCCGGCGG ATTTCGGCCA CTACGGCGGT CTGATGATCC GCATGGCCTG GCATTCGGCC GGCACCTATC GCACCACCGA CGGCCGCGGC GGCGCCGGCG CCGGACAGCA GCGCTTCGCG  CCGCTGAACT CGTGGCCGGA CAACGCCAAT CTCGACAAGG CGCGCCGGCT GCTGTGGCCG ATCAAGCAGA AATACGGCAA CAAGATCTCG TGGGCCGATC TCTACGTGCT GACCGGCAAC  GTCGCGCTGG AATCGATGGG CTTCAAGACC TTCGGCTTCG CCGGCGGCCG TGCCGACACC TGGGAGCCCG AAGAGCTGTT CTGGGGTCCG GAAGGCTCCT GGCTCGGCGA TGAGCGCTAT  TCCGGCGAGC GCCAGCTGCA CGACGCGCTC GGCGCGGTGC AGATGGGCCT GATCTACGTC AACCCGGAAG GCCCGAACGG CAATCCTGAT CCGGTCGCCG CCGCCAAGGA CATCCGCGAG  ACCTTCGCCC GGATGGCGAT GAACGACGAA GAGACCGTGG CGCTGATCGC CGGCGGCCAC ACCTTCGGCA AGACCCACGG CGCCGGCGAT CCGTCGCTGA TCGGCGCGGA GCCGGAGGGC  GGGGCACTCG AGGATCAGGG CCTCGGCTGG AAGAGCAAGT TCGGCACCGG CTTCGGCGCC GACGCCATCA CCGGCGGGCC GGAAGTGATC TGGACGCAGA CGCCGACGCA GTGGAGCAAC  TTCTTCTTCG AAAACCTGTT CGGCTTCGAA TGGGAACTCG ACAAGAGCCC GGCCGGCGCC AAGCAGTGGA AGGCCAAGGG CGCCGAGGCG ACCGTGCCGG ATCCGTTCGA TCCGACCAAG  AAGCGCGTGC CGACGATGCT GACGACCGAC CTGTCGCTGC GCTTCGACCC CGCCTACGAG AAGATCTCGC GCCGCTTTTT CGAGAACCCG GATCAGTTCG CCGACGCCTT CGCCCGCGCC  TGGTTCAAGC TGACCCACCG CGACATGGGC CCGAAGGTGC GCTATCGCGG CAAGCTGGTG CCGAAGGAAG ATCTGATCTG GCAGGACCCG ATCCCGCCGG TCGACCACGA GCTGGTCAGC  GCCAAGGACA TCGCCGATCT CAAGGCGCGG ATCCTCGCCT CCGGCCTGTC GGTGTCGCAG CTGGTCTCGA CCGCGTTCGC CTCGGCCTCG ACCTATCGCC ATTCCGACAA GCGCGGCGGC  GCCAACGGCG CGCGCATCCG CTTCGCGCCG CAGAAGGATT GGGAGGTCAA CCAGCCGGCC GATCTCGCCC AGGTGCTCGG CAAGCTCGAA GCGATCCAGA AGGCGTTCAA CGACGCGCAG  TCGGGCGGCA AGAAGGTCTC GCTCGCCGAC CTGATCGTGC TCGGCGGCTC AGCCGCGGTC GAGAAGGCCG CCAAGGATGC CGGCACCGAG GTCGAGGTGC CGTTCACCCC GGGCCGGATG  GACGCGCTGG AAGAGCAGAC CGACGGCGAT TCGTTCAAGG TGCTGGAGCC GCGGGCCGAC GGCTTCCGCA ACTTCATCGG CAAGCGGCAT CAGTTCATGC AGCCCGAAGA AGCGCTGGTC  GATCGCGCGC AGCTCCTCAA CCTGACTGCG CCGGAAATGA CGGTGCTGCT CGGCGGCCTG CGCGTGCTCG GCGGCAATGT CGGCCACGAC AGCCACGGCG TCTTCACCGA CCGGCCGGAG  AAGCTGACCA ACGACTTCTT CGTCAACCTC TTGGACATGA AGACCGCCTG GTCGCTCTCG GCCACCGCCG AAGGCGTCTA TGAAGGCCGC GACCGCAAGA CCGGCGACCT GCGCTGGACC  GGCACCCGCG TCGATCTGAT CTTCGGCTCG CACTCGCAGC TGCGCGCGCT CGCCGAAGTC TACGGTCAGT CCGACGCCCA GACGAAGTTC GCCCAGGACT TCGTCGCCGC CTGGACCAAG 
GTGATGAACG CGGATCGGTT CGACCTCGCG GCGAAG 

Retrieve as FASTA