Entry information : RpCP01_HaA2
Entry ID 3652
Creation 2006-08-25 (Filippo Passardi)
Last sequence changes 2016-01-06 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-06 (Christophe Dunand)
Peroxidase information: RpCP01_HaA2
Name RpCP01_HaA2
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Bradyrhizobiaceae Rhodopseudomonas
Organism Rhodopseudomonas palustris    [TaxId: 1076 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RpCP01_HaA2
start..stop
S start..stop
RpCP01_BisB5 1340 0 1..732 1..732
RpCP01_CGA009 1248 0 1..732 1..732
RpCP01_BisA53 1201 0 1..730 1..729
MnoCP01 1189 0 1..732 1..729
Literature and cross-references RpCP01_HaA2
Literature Copeland,A et al., CONSRTM US DOE Joint Genome Institute. Direct Submission (20-JAN-2006)
Protein ref. GenBank:   ABD05321.1 UniProtKB:   Q2J2I9
DNA ref. GenBank:   CP000250.1 (686790..688988)
Protein sequence: RpCP01_HaA2
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   732
PWM (Da):   %s   80484.17  
PI (pH):   %s   5.38
Sequence
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Send to Peroxiscan
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MDAKTDDKDG GKCPFPHGGG RGRRNSDWWP EHLDISLLHR NSTLSDPMGK GFDYAREFES LDLDAVIKDL HALMTDSQDW WPADFGHYGG LMVRMAWHSA GTYRTTDGRG GAGAGQQRFA  PLNSWPDNAN LDKARRLLWP IKQKYGNKIS WADLYVLTGN VALESMGFKT FGFAGGRADT WEPEELFWGP EGSWLGDERY SGERELSDPL GAVQMGLIYV NPEGPNGNPD PVAAAKDIRE  TFARMAMNDE ETVALIAGGH TFGKTHGAGD PSLIGAEPEG GALEDQGLGW KSSFGTGFGA DAITGGPEVI WTQTPTQWSN HFFENLFGFE WELDKSPAGA KQWKAKGAEA NIPDPFDPTK  KRLPTMLTTD LSLRFDPAYE KISRRFLENP DQFADAFARA WFKLTHRDMG PKVRYRGKLV PKEDLIWQDP IPPVDHELVG DKDIAALKAK ILGSGLSVSQ LVSAAFASAS TYRHSDKRGG  ANGARIRFAP QKDWEVNQPS DLAQVLSKLE AIQKEFNGAQ TDGKKVSLAD LIVLGGCAAV EKAAKDAGTD IQVPFTPGRM DALEEQTDAD SFKVLEPRAD GFRNFIGKRK QYMSPEESLV  DRAQLLNLTA PEMTALLGGL RVLGGNVGHT THGVFTERPE KLTNDFFVNL LDMKTAWSPS ATTEVVYEGR DRKTGELRWT GTRVDLIFGS HSQLRALAEV YAQSDAQPKF ARDFVAAWTK 
VMNADRFDIV AK 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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ATGGACGCAA AGACGGACGA CAAGGACGGC GGCAAATGCC CGTTCCCGCA TGGCGGCGGG CGCGGGCGCC GGAACAGCGA CTGGTGGCCG GAGCATCTCG ACATCAGCCT GCTGCATCGC  AATTCGACGC TGTCCGATCC GATGGGCAAG GGCTTCGATT ACGCCCGTGA ATTCGAGAGC CTCGATCTCG ACGCGGTGAT CAAGGATCTG CACGCGCTGA TGACCGATTC GCAGGACTGG  TGGCCGGCGG ATTTCGGCCA CTATGGCGGC CTGATGGTCC GCATGGCCTG GCATTCGGCC GGCACCTATC GCACCACCGA CGGCCGCGGC GGCGCCGGCG CCGGCCAGCA GCGCTTCGCG  CCGCTGAATT CGTGGCCGGA CAACGCCAAC CTCGACAAGG CGCGCCGGCT GCTGTGGCCG ATCAAGCAGA AATACGGCAA CAAGATCTCG TGGGCCGACC TCTACGTGCT GACCGGCAAC  GTCGCGCTGG AATCGATGGG CTTCAAGACC TTCGGCTTCG CCGGCGGCCG CGCCGACACC TGGGAGCCCG AGGAGCTGTT CTGGGGTCCT GAAGGCAGCT GGCTCGGCGA CGAGCGCTAC  AGCGGCGAGC GCGAACTCTC CGACCCGCTC GGCGCCGTGC AGATGGGCCT GATCTACGTC AACCCGGAAG GCCCGAACGG CAATCCCGAC CCGGTCGCCG CCGCCAAGGA CATCCGCGAG  ACCTTCGCCC GCATGGCGAT GAACGACGAA GAGACCGTGG CGCTGATCGC CGGCGGCCAC ACCTTCGGCA AGACCCACGG CGCCGGCGAT CCGTCGCTGA TCGGCGCGGA GCCCGAAGGC  GGCGCGCTGG AGGATCAGGG GCTCGGCTGG AAGAGCAGCT TCGGCACCGG CTTCGGCGCC GACGCCATCA CCGGCGGCCC GGAAGTGATC TGGACCCAGA CCCCGACGCA GTGGAGCAAC  CACTTCTTCG AAAACCTGTT CGGCTTCGAA TGGGAGCTCG ACAAGAGCCC CGCCGGCGCC AAGCAGTGGA AGGCCAAGGG CGCCGAGGCG AATATTCCGG ATCCGTTCGA TCCGACCAAG  AAGCGCCTGC CGACGATGCT GACCACCGAC CTGTCGCTGC GCTTCGACCC GGCCTACGAG AAGATCTCGC GGCGCTTCCT CGAGAACCCG GATCAGTTCG CCGACGCCTT CGCCCGCGCC  TGGTTCAAGC TGACCCATCG CGACATGGGC CCGAAGGTGC GCTATCGCGG CAAGCTGGTG CCGAAGGAAG ACCTGATCTG GCAGGATCCG ATCCCGCCGG TCGATCACGA GCTGGTCGGC  GACAAGGACA TCGCCGCTCT CAAGGCGAAG ATCCTCGGCT CCGGCCTGTC GGTGTCGCAG CTGGTCTCCG CGGCGTTCGC CTCGGCCTCG ACCTATCGCC ACTCCGACAA GCGCGGCGGC  GCCAATGGCG CGCGCATCCG CTTCGCCCCG CAGAAGGATT GGGAGGTCAA CCAGCCGTCC GATCTCGCCC AGGTGCTGAG CAAGCTCGAA GCGATTCAGA AGGAGTTCAA CGGCGCGCAG  ACCGACGGCA AGAAGGTCTC GCTCGCCGAT CTGATCGTGC TCGGCGGCTG CGCCGCCGTC GAGAAGGCGG CGAAGGACGC CGGCACCGAC ATCCAGGTGC CGTTCACCCC GGGCCGGATG  GACGCGCTGG AAGAGCAGAC CGACGCCGAC TCGTTCAAGG TGCTGGAGCC GCGCGCCGAC GGCTTCCGCA ACTTCATCGG CAAGCGCAAG CAGTACATGT CGCCGGAAGA ATCGCTGGTC  GATCGCGCGC AACTGCTCAA CCTGACGGCG CCGGAAATGA CGGCGCTGCT CGGCGGGCTG CGCGTGCTCG GCGGCAATGT CGGCCACACC ACCCACGGCG TGTTCACCGA GCGGCCGGAG  AAGCTGACCA ACGACTTCTT CGTCAACCTG CTCGACATGA AGACCGCCTG GTCGCCCTCG GCCACCACCG AAGTCGTCTA TGAGGGGCGC GATCGCAAGA CCGGCGAACT GCGCTGGACC  GGCACCCGCG TCGACCTGAT CTTCGGCTCG CACTCGCAGC TGCGCGCGCT CGCCGAAGTC TACGCCCAGT CCGACGCCCA GCCGAAGTTC GCCCGCGACT TCGTCGCCGC CTGGACCAAG 
GTGATGAACG CCGACCGCTT CGACATCGTC GCGAAG 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCAA AGACGGACGA CAAGGACGGC GGCAAATGCC CGTTCCCGCA TGGCGGCGGG CGCGGGCGCC GGAACAGCGA CTGGTGGCCG GAGCATCTCG ACATCAGCCT GCTGCATCGC  AATTCGACGC TGTCCGATCC GATGGGCAAG GGCTTCGATT ACGCCCGTGA ATTCGAGAGC CTCGATCTCG ACGCGGTGAT CAAGGATCTG CACGCGCTGA TGACCGATTC GCAGGACTGG  TGGCCGGCGG ATTTCGGCCA CTATGGCGGC CTGATGGTCC GCATGGCCTG GCATTCGGCC GGCACCTATC GCACCACCGA CGGCCGCGGC GGCGCCGGCG CCGGCCAGCA GCGCTTCGCG  CCGCTGAATT CGTGGCCGGA CAACGCCAAC CTCGACAAGG CGCGCCGGCT GCTGTGGCCG ATCAAGCAGA AATACGGCAA CAAGATCTCG TGGGCCGACC TCTACGTGCT GACCGGCAAC  GTCGCGCTGG AATCGATGGG CTTCAAGACC TTCGGCTTCG CCGGCGGCCG CGCCGACACC TGGGAGCCCG AGGAGCTGTT CTGGGGTCCT GAAGGCAGCT GGCTCGGCGA CGAGCGCTAC  AGCGGCGAGC GCGAACTCTC CGACCCGCTC GGCGCCGTGC AGATGGGCCT GATCTACGTC AACCCGGAAG GCCCGAACGG CAATCCCGAC CCGGTCGCCG CCGCCAAGGA CATCCGCGAG  ACCTTCGCCC GCATGGCGAT GAACGACGAA GAGACCGTGG CGCTGATCGC CGGCGGCCAC ACCTTCGGCA AGACCCACGG CGCCGGCGAT CCGTCGCTGA TCGGCGCGGA GCCCGAAGGC  GGCGCGCTGG AGGATCAGGG GCTCGGCTGG AAGAGCAGCT TCGGCACCGG CTTCGGCGCC GACGCCATCA CCGGCGGCCC GGAAGTGATC TGGACCCAGA CCCCGACGCA GTGGAGCAAC  CACTTCTTCG AAAACCTGTT CGGCTTCGAA TGGGAGCTCG ACAAGAGCCC CGCCGGCGCC AAGCAGTGGA AGGCCAAGGG CGCCGAGGCG AATATTCCGG ATCCGTTCGA TCCGACCAAG  AAGCGCCTGC CGACGATGCT GACCACCGAC CTGTCGCTGC GCTTCGACCC GGCCTACGAG AAGATCTCGC GGCGCTTCCT CGAGAACCCG GATCAGTTCG CCGACGCCTT CGCCCGCGCC  TGGTTCAAGC TGACCCATCG CGACATGGGC CCGAAGGTGC GCTATCGCGG CAAGCTGGTG CCGAAGGAAG ACCTGATCTG GCAGGATCCG ATCCCGCCGG TCGATCACGA GCTGGTCGGC  GACAAGGACA TCGCCGCTCT CAAGGCGAAG ATCCTCGGCT CCGGCCTGTC GGTGTCGCAG CTGGTCTCCG CGGCGTTCGC CTCGGCCTCG ACCTATCGCC ACTCCGACAA GCGCGGCGGC  GCCAATGGCG CGCGCATCCG CTTCGCCCCG CAGAAGGATT GGGAGGTCAA CCAGCCGTCC GATCTCGCCC AGGTGCTGAG CAAGCTCGAA GCGATTCAGA AGGAGTTCAA CGGCGCGCAG  ACCGACGGCA AGAAGGTCTC GCTCGCCGAT CTGATCGTGC TCGGCGGCTG CGCCGCCGTC GAGAAGGCGG CGAAGGACGC CGGCACCGAC ATCCAGGTGC CGTTCACCCC GGGCCGGATG  GACGCGCTGG AAGAGCAGAC CGACGCCGAC TCGTTCAAGG TGCTGGAGCC GCGCGCCGAC GGCTTCCGCA ACTTCATCGG CAAGCGCAAG CAGTACATGT CGCCGGAAGA ATCGCTGGTC  GATCGCGCGC AACTGCTCAA CCTGACGGCG CCGGAAATGA CGGCGCTGCT CGGCGGGCTG CGCGTGCTCG GCGGCAATGT CGGCCACACC ACCCACGGCG TGTTCACCGA GCGGCCGGAG  AAGCTGACCA ACGACTTCTT CGTCAACCTG CTCGACATGA AGACCGCCTG GTCGCCCTCG GCCACCACCG AAGTCGTCTA TGAGGGGCGC GATCGCAAGA CCGGCGAACT GCGCTGGACC  GGCACCCGCG TCGACCTGAT CTTCGGCTCG CACTCGCAGC TGCGCGCGCT CGCCGAAGTC TACGCCCAGT CCGACGCCCA GCCGAAGTTC GCCCGCGACT TCGTCGCCGC CTGGACCAAG 
GTGATGAACG CCGACCGCTT CGACATCGTC GCGAAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCAA AGACGGACGA CAAGGACGGC GGCAAATGCC CGTTCCCGCA TGGCGGCGGG CGCGGGCGCC GGAACAGCGA CTGGTGGCCG GAGCATCTCG ACATCAGCCT GCTGCATCGC  AATTCGACGC TGTCCGATCC GATGGGCAAG GGCTTCGATT ACGCCCGTGA ATTCGAGAGC CTCGATCTCG ACGCGGTGAT CAAGGATCTG CACGCGCTGA TGACCGATTC GCAGGACTGG  TGGCCGGCGG ATTTCGGCCA CTATGGCGGC CTGATGGTCC GCATGGCCTG GCATTCGGCC GGCACCTATC GCACCACCGA CGGCCGCGGC GGCGCCGGCG CCGGCCAGCA GCGCTTCGCG  CCGCTGAATT CGTGGCCGGA CAACGCCAAC CTCGACAAGG CGCGCCGGCT GCTGTGGCCG ATCAAGCAGA AATACGGCAA CAAGATCTCG TGGGCCGACC TCTACGTGCT GACCGGCAAC  GTCGCGCTGG AATCGATGGG CTTCAAGACC TTCGGCTTCG CCGGCGGCCG CGCCGACACC TGGGAGCCCG AGGAGCTGTT CTGGGGTCCT GAAGGCAGCT GGCTCGGCGA CGAGCGCTAC  AGCGGCGAGC GCGAACTCTC CGACCCGCTC GGCGCCGTGC AGATGGGCCT GATCTACGTC AACCCGGAAG GCCCGAACGG CAATCCCGAC CCGGTCGCCG CCGCCAAGGA CATCCGCGAG  ACCTTCGCCC GCATGGCGAT GAACGACGAA GAGACCGTGG CGCTGATCGC CGGCGGCCAC ACCTTCGGCA AGACCCACGG CGCCGGCGAT CCGTCGCTGA TCGGCGCGGA GCCCGAAGGC  GGCGCGCTGG AGGATCAGGG GCTCGGCTGG AAGAGCAGCT TCGGCACCGG CTTCGGCGCC GACGCCATCA CCGGCGGCCC GGAAGTGATC TGGACCCAGA CCCCGACGCA GTGGAGCAAC  CACTTCTTCG AAAACCTGTT CGGCTTCGAA TGGGAGCTCG ACAAGAGCCC CGCCGGCGCC AAGCAGTGGA AGGCCAAGGG CGCCGAGGCG AATATTCCGG ATCCGTTCGA TCCGACCAAG  AAGCGCCTGC CGACGATGCT GACCACCGAC CTGTCGCTGC GCTTCGACCC GGCCTACGAG AAGATCTCGC GGCGCTTCCT CGAGAACCCG GATCAGTTCG CCGACGCCTT CGCCCGCGCC  TGGTTCAAGC TGACCCATCG CGACATGGGC CCGAAGGTGC GCTATCGCGG CAAGCTGGTG CCGAAGGAAG ACCTGATCTG GCAGGATCCG ATCCCGCCGG TCGATCACGA GCTGGTCGGC  GACAAGGACA TCGCCGCTCT CAAGGCGAAG ATCCTCGGCT CCGGCCTGTC GGTGTCGCAG CTGGTCTCCG CGGCGTTCGC CTCGGCCTCG ACCTATCGCC ACTCCGACAA GCGCGGCGGC  GCCAATGGCG CGCGCATCCG CTTCGCCCCG CAGAAGGATT GGGAGGTCAA CCAGCCGTCC GATCTCGCCC AGGTGCTGAG CAAGCTCGAA GCGATTCAGA AGGAGTTCAA CGGCGCGCAG  ACCGACGGCA AGAAGGTCTC GCTCGCCGAT CTGATCGTGC TCGGCGGCTG CGCCGCCGTC GAGAAGGCGG CGAAGGACGC CGGCACCGAC ATCCAGGTGC CGTTCACCCC GGGCCGGATG  GACGCGCTGG AAGAGCAGAC CGACGCCGAC TCGTTCAAGG TGCTGGAGCC GCGCGCCGAC GGCTTCCGCA ACTTCATCGG CAAGCGCAAG CAGTACATGT CGCCGGAAGA ATCGCTGGTC  GATCGCGCGC AACTGCTCAA CCTGACGGCG CCGGAAATGA CGGCGCTGCT CGGCGGGCTG CGCGTGCTCG GCGGCAATGT CGGCCACACC ACCCACGGCG TGTTCACCGA GCGGCCGGAG  AAGCTGACCA ACGACTTCTT CGTCAACCTG CTCGACATGA AGACCGCCTG GTCGCCCTCG GCCACCACCG AAGTCGTCTA TGAGGGGCGC GATCGCAAGA CCGGCGAACT GCGCTGGACC  GGCACCCGCG TCGACCTGAT CTTCGGCTCG CACTCGCAGC TGCGCGCGCT CGCCGAAGTC TACGCCCAGT CCGACGCCCA GCCGAAGTTC GCCCGCGACT TCGTCGCCGC CTGGACCAAG 
GTGATGAACG CCGACCGCTT CGACATCGTC GCGAAG 

Retrieve as FASTA