Entry information : JspCP01_CCS1
Entry ID 3654
Creation 2006-08-25 (Filippo Passardi)
Last sequence changes 2015-12-20 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2015-12-20 (Christophe Dunand)
Peroxidase information: JspCP01_CCS1
Name JspCP01_CCS1
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Rhodobacteraceae Jannaschia
Organism Jannaschia sp.    [TaxId: 290400 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value JspCP01_CCS1
start..stop
S start..stop
RosCP01 975 0 2..733 1..737
RblCP01 969 0 6..733 4..733
SIsCP01 953 0 2..733 1..737
RnCP01 939 0 26..733 15..727
Literature and cross-references JspCP01_CCS1
Literature Moran,M.A. et al., Ecological genomics of marine Roseobacters. JOURNAL Appl. Environ. Microbiol. 73 (14), 4559-4569 (2007)
Protein ref. GenBank:   ABD54503.1 UniProtKB:   Q28S09
DNA ref. GenBank:   CP000264.1 (1567446..1569653)
Protein sequence: JspCP01_CCS1
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   735
PWM (Da):   %s   79721.42  
PI (pH):   %s   4.43
Sequence
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Send to Peroxiscan
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MMDGAQTNSG GCPVMHGGGS RPMGATANQH WWPNQLNLKP LSANSEKLDP MGEGFDYAEE FQKLDMAAVK ADIANCLKDS QDWWPADYGH YGPLMIRLAW HSAGTYRTYD GRGGAGTGTQ  RFAPLNSWPD NGNLDKARRI LWPIKEKYGK SLSWADLLIL VGNVALEDMG FETFGFAGGR ADVWEPEEDI YWGPETEWLA TSDMENTRYG EGRDLHNPLA AVQMGLIYVN PQGPDGNPDP  LASAFDIRDT FARMAMNDEE TVALVAGGHT FGKAHGAGDP DLVGAEPEGA DVAEMGLGWK NGFESGKGVH STTSGVEGPW TPTPTQWDMS YFDVLFGHEW ELTKSPAGAH QWRPVDHEND  QAPQVDGNGT VPIMMTTADM AMRMDPAYEK ISRDFHANPD KFADAFARAW YKLTHRDMGP IQRYLGNDVP SEELLWQDPV PMPQGPQVND DEQAELKAAV AATGLTAAEL VRVAWGSAAS  YRDSDKRGGA NGARIRLQPA RGWTVNNPEE LDKVLPVLDS IADAFNGRGG TQITMADMIV LAGGVGVEMA AREAGHNIHV PFTPGRGDAT QEQTDVDSYD VLEPTSDGFR NYHATFSLRE  PAEMLVDKAA LLGLTAPEMT VLVGGLRAIG ATHGGARHGV LTETPGALNN AFFKNVLSMD TVWNQTDSAI LEGKDRASGQ VKWTATIVDL VFGSNSQLRA VAEVYASADA EAKMVDDFVA 
AWVKVMENDR FDLHR 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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ATGATGGACG GAGCCCAAAC GAACTCAGGC GGTTGCCCTG TCATGCACGG TGGGGGCAGC CGCCCCATGG GTGCGACGGC GAACCAGCAT TGGTGGCCCA ACCAGCTGAA CCTCAAGCCG  CTGTCGGCGA ATTCGGAGAA GCTGGATCCG ATGGGCGAGG GCTTTGATTA TGCTGAGGAA TTCCAGAAGC TGGATATGGC GGCTGTCAAG GCCGATATCG CCAACTGCCT GAAAGACAGC  CAGGATTGGT GGCCTGCCGA TTACGGCCAT TACGGCCCGC TAATGATCCG CCTGGCCTGG CATTCTGCCG GCACCTACCG CACCTATGAC GGGCGCGGCG GGGCGGGCAC CGGCACGCAG  CGGTTTGCGC CGCTGAACTC CTGGCCCGAC AACGGGAACC TCGACAAGGC GCGCCGCATT CTGTGGCCGA TCAAGGAGAA GTACGGCAAG TCCCTGTCCT GGGCGGATCT GCTGATCCTG  GTGGGCAATG TCGCGCTGGA AGACATGGGG TTTGAGACCT TCGGATTCGC CGGTGGCCGC GCCGATGTGT GGGAGCCCGA AGAGGACATC TACTGGGGCC CCGAGACCGA GTGGCTGGCC  ACGTCCGACA TGGAAAACAC CCGTTACGGC GAAGGGCGCG ATTTGCATAA CCCGCTGGCC GCCGTGCAGA TGGGCCTGAT CTACGTCAAT CCGCAGGGGC CCGACGGCAA CCCCGATCCT  CTGGCCTCGG CCTTTGACAT CCGTGACACC TTTGCGCGTA TGGCGATGAA CGACGAGGAA ACCGTGGCGC TGGTCGCGGG CGGTCACACC TTCGGCAAGG CCCATGGCGC GGGCGATCCT  GATCTGGTGG GGGCTGAGCC CGAAGGCGCG GATGTGGCCG AGATGGGTCT GGGCTGGAAG AATGGGTTCG AGAGCGGCAA GGGCGTGCAT TCCACAACCT CTGGCGTGGA AGGCCCGTGG  ACGCCGACGC CGACCCAATG GGATATGTCC TATTTCGACG TGTTGTTCGG CCATGAATGG GAGCTGACGA AATCCCCCGC AGGCGCGCAT CAATGGCGTC CCGTGGACCA CGAGAATGAT  CAGGCCCCCC AGGTGGACGG CAACGGCACC GTGCCGATCA TGATGACGAC CGCCGACATG GCGATGCGCA TGGACCCGGC CTACGAGAAG ATCAGCCGTG ACTTTCACGC CAACCCCGAC  AAGTTCGCCG ATGCCTTCGC GCGGGCCTGG TACAAGCTGA CCCACCGCGA CATGGGGCCG ATCCAGCGCT ATCTGGGCAA TGACGTCCCG TCGGAGGAGC TTTTGTGGCA GGATCCCGTG  CCGATGCCGC AGGGTCCACA GGTCAACGAC GATGAGCAGG CCGAGCTGAA GGCTGCCGTC GCGGCGACTG GTCTGACGGC GGCGGAGCTG GTCCGTGTGG CCTGGGGGTC CGCCGCGTCC  TACCGCGACA GCGACAAGCG GGGTGGGGCC AACGGCGCGC GCATTCGGTT GCAGCCCGCC CGTGGATGGA CGGTGAACAA CCCCGAGGAG TTGGATAAGG TTCTGCCGGT GCTGGACAGC  ATCGCGGACG CCTTCAACGG CAGGGGCGGT ACGCAGATCA CCATGGCTGA CATGATCGTA TTGGCTGGCG GTGTCGGTGT CGAAATGGCG GCCCGCGAGG CGGGTCATAA CATCCACGTG  CCCTTCACGC CTGGTCGCGG CGATGCCACG CAGGAGCAGA CGGATGTGGA CAGCTATGAC GTGCTGGAGC CGACCTCCGA CGGGTTCCGC AACTACCACG CCACGTTCTC CCTGCGCGAA  CCGGCGGAAA TGCTGGTCGA TAAGGCGGCC CTTCTGGGTC TGACAGCGCC GGAGATGACG GTGCTGGTGG GCGGTCTGCG CGCCATCGGG GCGACCCATG GCGGGGCCAG GCATGGTGTG  CTGACCGAGA CGCCGGGCGC GCTGAACAAC GCGTTTTTCA AGAATGTGCT CAGCATGGAC ACGGTCTGGA ACCAGACGGA TAGCGCGATC CTCGAGGGCA AGGATCGCGC CTCGGGTCAG  GTCAAGTGGA CGGCCACAAT TGTGGATCTG GTTTTCGGGT CGAACAGTCA GCTGCGCGCC GTCGCGGAGG TTTATGCAAG CGCGGATGCG GAGGCCAAGA TGGTCGACGA TTTCGTCGCT 
GCCTGGGTCA AGGTGATGGA AAACGACCGC TTCGACCTGC ATCGC 

Retrieve as FASTA  
CDS
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ATGATGGACG GAGCCCAAAC GAACTCAGGC GGTTGCCCTG TCATGCACGG TGGGGGCAGC CGCCCCATGG GTGCGACGGC GAACCAGCAT TGGTGGCCCA ACCAGCTGAA CCTCAAGCCG  CTGTCGGCGA ATTCGGAGAA GCTGGATCCG ATGGGCGAGG GCTTTGATTA TGCTGAGGAA TTCCAGAAGC TGGATATGGC GGCTGTCAAG GCCGATATCG CCAACTGCCT GAAAGACAGC  CAGGATTGGT GGCCTGCCGA TTACGGCCAT TACGGCCCGC TAATGATCCG CCTGGCCTGG CATTCTGCCG GCACCTACCG CACCTATGAC GGGCGCGGCG GGGCGGGCAC CGGCACGCAG  CGGTTTGCGC CGCTGAACTC CTGGCCCGAC AACGGGAACC TCGACAAGGC GCGCCGCATT CTGTGGCCGA TCAAGGAGAA GTACGGCAAG TCCCTGTCCT GGGCGGATCT GCTGATCCTG  GTGGGCAATG TCGCGCTGGA AGACATGGGG TTTGAGACCT TCGGATTCGC CGGTGGCCGC GCCGATGTGT GGGAGCCCGA AGAGGACATC TACTGGGGCC CCGAGACCGA GTGGCTGGCC  ACGTCCGACA TGGAAAACAC CCGTTACGGC GAAGGGCGCG ATTTGCATAA CCCGCTGGCC GCCGTGCAGA TGGGCCTGAT CTACGTCAAT CCGCAGGGGC CCGACGGCAA CCCCGATCCT  CTGGCCTCGG CCTTTGACAT CCGTGACACC TTTGCGCGTA TGGCGATGAA CGACGAGGAA ACCGTGGCGC TGGTCGCGGG CGGTCACACC TTCGGCAAGG CCCATGGCGC GGGCGATCCT  GATCTGGTGG GGGCTGAGCC CGAAGGCGCG GATGTGGCCG AGATGGGTCT GGGCTGGAAG AATGGGTTCG AGAGCGGCAA GGGCGTGCAT TCCACAACCT CTGGCGTGGA AGGCCCGTGG  ACGCCGACGC CGACCCAATG GGATATGTCC TATTTCGACG TGTTGTTCGG CCATGAATGG GAGCTGACGA AATCCCCCGC AGGCGCGCAT CAATGGCGTC CCGTGGACCA CGAGAATGAT  CAGGCCCCCC AGGTGGACGG CAACGGCACC GTGCCGATCA TGATGACGAC CGCCGACATG GCGATGCGCA TGGACCCGGC CTACGAGAAG ATCAGCCGTG ACTTTCACGC CAACCCCGAC  AAGTTCGCCG ATGCCTTCGC GCGGGCCTGG TACAAGCTGA CCCACCGCGA CATGGGGCCG ATCCAGCGCT ATCTGGGCAA TGACGTCCCG TCGGAGGAGC TTTTGTGGCA GGATCCCGTG  CCGATGCCGC AGGGTCCACA GGTCAACGAC GATGAGCAGG CCGAGCTGAA GGCTGCCGTC GCGGCGACTG GTCTGACGGC GGCGGAGCTG GTCCGTGTGG CCTGGGGGTC CGCCGCGTCC  TACCGCGACA GCGACAAGCG GGGTGGGGCC AACGGCGCGC GCATTCGGTT GCAGCCCGCC CGTGGATGGA CGGTGAACAA CCCCGAGGAG TTGGATAAGG TTCTGCCGGT GCTGGACAGC  ATCGCGGACG CCTTCAACGG CAGGGGCGGT ACGCAGATCA CCATGGCTGA CATGATCGTA TTGGCTGGCG GTGTCGGTGT CGAAATGGCG GCCCGCGAGG CGGGTCATAA CATCCACGTG  CCCTTCACGC CTGGTCGCGG CGATGCCACG CAGGAGCAGA CGGATGTGGA CAGCTATGAC GTGCTGGAGC CGACCTCCGA CGGGTTCCGC AACTACCACG CCACGTTCTC CCTGCGCGAA  CCGGCGGAAA TGCTGGTCGA TAAGGCGGCC CTTCTGGGTC TGACAGCGCC GGAGATGACG GTGCTGGTGG GCGGTCTGCG CGCCATCGGG GCGACCCATG GCGGGGCCAG GCATGGTGTG  CTGACCGAGA CGCCGGGCGC GCTGAACAAC GCGTTTTTCA AGAATGTGCT CAGCATGGAC ACGGTCTGGA ACCAGACGGA TAGCGCGATC CTCGAGGGCA AGGATCGCGC CTCGGGTCAG  GTCAAGTGGA CGGCCACAAT TGTGGATCTG GTTTTCGGGT CGAACAGTCA GCTGCGCGCC GTCGCGGAGG TTTATGCAAG CGCGGATGCG GAGGCCAAGA TGGTCGACGA TTTCGTCGCT 
GCCTGGGTCA AGGTGATGGA AAACGACCGC TTCGACCTGC ATCGC 

Retrieve as FASTA