Entry information : RpCP01_BisB18
Entry ID 3655
Creation 2006-08-25 (Filippo Passardi)
Last sequence changes 2016-01-06 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-06 (Christophe Dunand)
Peroxidase information: RpCP01_BisB18
Name RpCP01_BisB18
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Bradyrhizobiaceae Rhodopseudomonas
Organism Rhodopseudomonas palustris    [TaxId: 1076 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RpCP01_BisB18
start..stop
S start..stop
RpCP01_BisA53 1226 0 1..722 1..729
RpCP01_CGA009 1200 0 1..724 1..732
SuCP01 1185 0 3..721 13..731
SmedCP01 1170 0 1..722 42..768
Literature and cross-references RpCP01_BisB18
Literature Copeland,A et al., CONSRTM US DOE Joint Genome Institute. Direct Submission (20-MAR-2006)
Other sequence link http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=ABD85936.1
Protein ref. GenBank:   ABD85936.1 UniProtKB:   Q21CF0
DNA ref. GenBank:   90103542 (382237..384435)
Protein sequence: RpCP01_BisB18
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   732
PWM (Da):   %s   80259.3  
PI (pH):   %s   5.15
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDAKTDDKAG KCPVAHGPAP RGNRDWWPEQ LNLSMLHQRS PSADPLGKDF HYAEQFKTLD LKALKQDLTA LMTESQDWWP ADFGHYGGLF IRMAWHSAGT YRTTDGRGGA GAGQQRFAPL  NSWPDNANLD KARRLLWPIK QKYGQKISWA DLYVLAGNVA LESMGFQTFG FAGGRADTWE PEELFWGPEG TWLGDERYSG ERQLADPLGA VQMGLIYVNP EGPNGNPDPL GSAKDIRETF  ARMAMNDEET VALIAGGHTF GKTHGAGDPS LLGPEPEGGD VEDQGLGWKS KYGTGFGADA ITGGPEVIWS QEPTKWSNHF FDNLFKFEWE LTKSPAGAQQ WVAKNAEPSV PDPFDPSKKR  LPTMLTSDLA LRFDPIYEKI SRRFYENPDE FADAFARAWF KLTHRDMGPV ARYLGPEVPK ETLLWQDPIP PVDHELINDA DVEALKAKIL GSGLSVADLV STAWNSASTF RGSDKRGGAN  GARIRLAPQK DWEVNQPEQL ATVLQKLEAI GKEFGKKVSL ADLIVLGGVA AIEKAAKDAG VAVKVPFSPG RMDASQEQTD APSFAPLEPR ADGFRNYINS KKHQFMKPEE ALVDRAQLLT  LTAPEMTVLV GGLRVLGANA GDSKHGVFTT KPGTLSNDFF VNLLTMATSW QPSGTEGIYE GRDRKSGEVK WTATRVDLIF GSHSQLRALA EVYAQADSKE KFVNDFVAAW TKVMNADRFD 
LIAEPVLLEA AE 

Retrieve as FASTA  
Remarks Complete sequence from genomic.
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCCA AGACTGACGA CAAAGCCGGC AAATGCCCCG TCGCCCACGG CCCGGCGCCG CGCGGCAACC GCGACTGGTG GCCGGAGCAG CTCAACCTGT CGATGCTGCA CCAGCGCTCG  CCCTCCGCCG ACCCGCTCGG CAAGGATTTC CATTATGCCG AACAGTTCAA GACGCTCGAC CTCAAGGCGC TGAAACAGGA CCTCACCGCG CTGATGACGG AGTCGCAGGA CTGGTGGCCG  GCGGATTTCG GCCATTACGG CGGTCTGTTC ATCCGCATGG CCTGGCATAG CGCCGGCACC TATCGCACCA CCGACGGCCG CGGCGGCGCC GGCGCCGGCC AGCAGCGCTT CGCGCCGCTG  AATTCCTGGC CCGACAACGC CAATCTCGAC AAGGCGCGCC GGCTGTTGTG GCCGATCAAG CAGAAATACG GCCAGAAGAT TTCCTGGGCC GATCTCTATG TGCTGGCCGG CAACGTCGCG  CTGGAATCGA TGGGCTTTCA GACCTTCGGC TTTGCCGGCG GCCGCGCCGA TACCTGGGAG CCGGAAGAAT TGTTCTGGGG ACCCGAAGGC ACCTGGCTCG GCGACGAGCG CTACAGCGGC  GAGCGCCAGC TCGCCGATCC GCTCGGCGCA GTGCAGATGG GGCTGATCTA CGTCAATCCG GAAGGCCCGA ACGGCAACCC GGATCCGCTC GGGTCTGCCA AGGACATCCG CGAAACCTTC  GCCCGCATGG CGATGAACGA CGAAGAGACC GTGGCGCTGA TCGCCGGCGG CCACACCTTC GGCAAGACCC ACGGCGCCGG CGATCCGTCG CTGCTCGGGC CGGAGCCGGA AGGCGGCGAC  GTCGAGGACC AGGGGCTCGG CTGGAAGAGC AAATACGGCA CCGGCTTCGG CGCCGACGCC ATCACCGGCG GACCGGAAGT GATCTGGTCG CAGGAGCCGA CCAAGTGGAG CAACCACTTC  TTCGACAACC TGTTCAAGTT CGAATGGGAA TTGACCAAGA GCCCGGCCGG CGCCCAGCAA TGGGTCGCCA AGAACGCCGA GCCGTCGGTG CCGGACCCGT TCGACCCATC GAAGAAGCGG  CTGCCGACCA TGCTGACCTC CGACCTCGCG CTGCGCTTCG ATCCGATCTA CGAGAAGATC TCGCGGCGGT TCTACGAGAA TCCGGATGAG TTCGCCGACG CCTTCGCGCG GGCCTGGTTC  AAGCTGACCC ATCGCGATAT GGGCCCGGTG GCGCGCTATC TCGGCCCGGA AGTGCCGAAG GAAACGCTGC TCTGGCAGGA CCCGATCCCG CCGGTCGATC ATGAACTGAT CAACGACGCC  GACGTCGAAG CCTTGAAGGC CAAGATCCTC GGTTCGGGCC TCTCGGTCGC GGACCTGGTC TCCACCGCCT GGAATTCGGC CTCGACCTTC CGCGGCTCCG ACAAGCGCGG CGGCGCCAAT  GGCGCGCGCA TTCGTCTCGC TCCGCAGAAG GACTGGGAGG TCAACCAGCC GGAGCAGCTC GCAACCGTGC TGCAGAAGCT GGAAGCGATC GGCAAGGAGT TCGGCAAGAA GGTCTCGCTC  GCCGACCTGA TCGTGCTCGG CGGTGTCGCG GCGATCGAGA AGGCCGCCAA GGACGCCGGC GTCGCGGTCA AGGTGCCGTT CTCGCCGGGC CGCATGGACG CCTCGCAGGA GCAGACCGAC  GCGCCGTCCT TCGCGCCGCT GGAACCGCGC GCCGATGGCT TCCGCAACTA CATCAACAGC AAGAAGCACC AATTCATGAA GCCCGAAGAG GCTTTGGTGG ATCGGGCGCA GCTGTTGACG  TTGACCGCGC CGGAAATGAC CGTGCTGGTC GGCGGCCTGC GGGTGCTCGG CGCCAATGCG GGGGATTCCA AGCACGGCGT GTTCACCACC AAGCCGGGCA CGCTGAGCAA CGACTTCTTC  GTCAACCTGT TGACGATGGC GACGTCGTGG CAGCCCTCCG GGACGGAAGG CATCTATGAG GGCCGCGACC GCAAGTCGGG CGAAGTGAAG TGGACCGCGA CCCGCGTCGA CCTGATCTTC  GGCTCGCACT CGCAGCTGCG CGCGCTCGCC GAGGTCTATG CGCAGGCGGA TTCCAAAGAG AAGTTCGTCA ACGACTTCGT CGCCGCCTGG ACCAAGGTGA TGAACGCCGA CCGCTTCGAC 
CTCATCGCCG AGCCGGTGCT GCTGGAAGCC GCGGAG 

Retrieve as FASTA  
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCCA AGACTGACGA CAAAGCCGGC AAATGCCCCG TCGCCCACGG CCCGGCGCCG CGCGGCAACC GCGACTGGTG GCCGGAGCAG CTCAACCTGT CGATGCTGCA CCAGCGCTCG  CCCTCCGCCG ACCCGCTCGG CAAGGATTTC CATTATGCCG AACAGTTCAA GACGCTCGAC CTCAAGGCGC TGAAACAGGA CCTCACCGCG CTGATGACGG AGTCGCAGGA CTGGTGGCCG  GCGGATTTCG GCCATTACGG CGGTCTGTTC ATCCGCATGG CCTGGCATAG CGCCGGCACC TATCGCACCA CCGACGGCCG CGGCGGCGCC GGCGCCGGCC AGCAGCGCTT CGCGCCGCTG  AATTCCTGGC CCGACAACGC CAATCTCGAC AAGGCGCGCC GGCTGTTGTG GCCGATCAAG CAGAAATACG GCCAGAAGAT TTCCTGGGCC GATCTCTATG TGCTGGCCGG CAACGTCGCG  CTGGAATCGA TGGGCTTTCA GACCTTCGGC TTTGCCGGCG GCCGCGCCGA TACCTGGGAG CCGGAAGAAT TGTTCTGGGG ACCCGAAGGC ACCTGGCTCG GCGACGAGCG CTACAGCGGC  GAGCGCCAGC TCGCCGATCC GCTCGGCGCA GTGCAGATGG GGCTGATCTA CGTCAATCCG GAAGGCCCGA ACGGCAACCC GGATCCGCTC GGGTCTGCCA AGGACATCCG CGAAACCTTC  GCCCGCATGG CGATGAACGA CGAAGAGACC GTGGCGCTGA TCGCCGGCGG CCACACCTTC GGCAAGACCC ACGGCGCCGG CGATCCGTCG CTGCTCGGGC CGGAGCCGGA AGGCGGCGAC  GTCGAGGACC AGGGGCTCGG CTGGAAGAGC AAATACGGCA CCGGCTTCGG CGCCGACGCC ATCACCGGCG GACCGGAAGT GATCTGGTCG CAGGAGCCGA CCAAGTGGAG CAACCACTTC  TTCGACAACC TGTTCAAGTT CGAATGGGAA TTGACCAAGA GCCCGGCCGG CGCCCAGCAA TGGGTCGCCA AGAACGCCGA GCCGTCGGTG CCGGACCCGT TCGACCCATC GAAGAAGCGG  CTGCCGACCA TGCTGACCTC CGACCTCGCG CTGCGCTTCG ATCCGATCTA CGAGAAGATC TCGCGGCGGT TCTACGAGAA TCCGGATGAG TTCGCCGACG CCTTCGCGCG GGCCTGGTTC  AAGCTGACCC ATCGCGATAT GGGCCCGGTG GCGCGCTATC TCGGCCCGGA AGTGCCGAAG GAAACGCTGC TCTGGCAGGA CCCGATCCCG CCGGTCGATC ATGAACTGAT CAACGACGCC  GACGTCGAAG CCTTGAAGGC CAAGATCCTC GGTTCGGGCC TCTCGGTCGC GGACCTGGTC TCCACCGCCT GGAATTCGGC CTCGACCTTC CGCGGCTCCG ACAAGCGCGG CGGCGCCAAT  GGCGCGCGCA TTCGTCTCGC TCCGCAGAAG GACTGGGAGG TCAACCAGCC GGAGCAGCTC GCAACCGTGC TGCAGAAGCT GGAAGCGATC GGCAAGGAGT TCGGCAAGAA GGTCTCGCTC  GCCGACCTGA TCGTGCTCGG CGGTGTCGCG GCGATCGAGA AGGCCGCCAA GGACGCCGGC GTCGCGGTCA AGGTGCCGTT CTCGCCGGGC CGCATGGACG CCTCGCAGGA GCAGACCGAC  GCGCCGTCCT TCGCGCCGCT GGAACCGCGC GCCGATGGCT TCCGCAACTA CATCAACAGC AAGAAGCACC AATTCATGAA GCCCGAAGAG GCTTTGGTGG ATCGGGCGCA GCTGTTGACG  TTGACCGCGC CGGAAATGAC CGTGCTGGTC GGCGGCCTGC GGGTGCTCGG CGCCAATGCG GGGGATTCCA AGCACGGCGT GTTCACCACC AAGCCGGGCA CGCTGAGCAA CGACTTCTTC  GTCAACCTGT TGACGATGGC GACGTCGTGG CAGCCCTCCG GGACGGAAGG CATCTATGAG GGCCGCGACC GCAAGTCGGG CGAAGTGAAG TGGACCGCGA CCCGCGTCGA CCTGATCTTC  GGCTCGCACT CGCAGCTGCG CGCGCTCGCC GAGGTCTATG CGCAGGCGGA TTCCAAAGAG AAGTTCGTCA ACGACTTCGT CGCCGCCTGG ACCAAGGTGA TGAACGCCGA CCGCTTCGAC 
CTCATCGCCG AGCCGGTGCT GCTGGAAGCC GCGGAG 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCCA AGACTGACGA CAAAGCCGGC AAATGCCCCG TCGCCCACGG CCCGGCGCCG CGCGGCAACC GCGACTGGTG GCCGGAGCAG CTCAACCTGT CGATGCTGCA CCAGCGCTCG  CCCTCCGCCG ACCCGCTCGG CAAGGATTTC CATTATGCCG AACAGTTCAA GACGCTCGAC CTCAAGGCGC TGAAACAGGA CCTCACCGCG CTGATGACGG AGTCGCAGGA CTGGTGGCCG  GCGGATTTCG GCCATTACGG CGGTCTGTTC ATCCGCATGG CCTGGCATAG CGCCGGCACC TATCGCACCA CCGACGGCCG CGGCGGCGCC GGCGCCGGCC AGCAGCGCTT CGCGCCGCTG  AATTCCTGGC CCGACAACGC CAATCTCGAC AAGGCGCGCC GGCTGTTGTG GCCGATCAAG CAGAAATACG GCCAGAAGAT TTCCTGGGCC GATCTCTATG TGCTGGCCGG CAACGTCGCG  CTGGAATCGA TGGGCTTTCA GACCTTCGGC TTTGCCGGCG GCCGCGCCGA TACCTGGGAG CCGGAAGAAT TGTTCTGGGG ACCCGAAGGC ACCTGGCTCG GCGACGAGCG CTACAGCGGC  GAGCGCCAGC TCGCCGATCC GCTCGGCGCA GTGCAGATGG GGCTGATCTA CGTCAATCCG GAAGGCCCGA ACGGCAACCC GGATCCGCTC GGGTCTGCCA AGGACATCCG CGAAACCTTC  GCCCGCATGG CGATGAACGA CGAAGAGACC GTGGCGCTGA TCGCCGGCGG CCACACCTTC GGCAAGACCC ACGGCGCCGG CGATCCGTCG CTGCTCGGGC CGGAGCCGGA AGGCGGCGAC  GTCGAGGACC AGGGGCTCGG CTGGAAGAGC AAATACGGCA CCGGCTTCGG CGCCGACGCC ATCACCGGCG GACCGGAAGT GATCTGGTCG CAGGAGCCGA CCAAGTGGAG CAACCACTTC  TTCGACAACC TGTTCAAGTT CGAATGGGAA TTGACCAAGA GCCCGGCCGG CGCCCAGCAA TGGGTCGCCA AGAACGCCGA GCCGTCGGTG CCGGACCCGT TCGACCCATC GAAGAAGCGG  CTGCCGACCA TGCTGACCTC CGACCTCGCG CTGCGCTTCG ATCCGATCTA CGAGAAGATC TCGCGGCGGT TCTACGAGAA TCCGGATGAG TTCGCCGACG CCTTCGCGCG GGCCTGGTTC  AAGCTGACCC ATCGCGATAT GGGCCCGGTG GCGCGCTATC TCGGCCCGGA AGTGCCGAAG GAAACGCTGC TCTGGCAGGA CCCGATCCCG CCGGTCGATC ATGAACTGAT CAACGACGCC  GACGTCGAAG CCTTGAAGGC CAAGATCCTC GGTTCGGGCC TCTCGGTCGC GGACCTGGTC TCCACCGCCT GGAATTCGGC CTCGACCTTC CGCGGCTCCG ACAAGCGCGG CGGCGCCAAT  GGCGCGCGCA TTCGTCTCGC TCCGCAGAAG GACTGGGAGG TCAACCAGCC GGAGCAGCTC GCAACCGTGC TGCAGAAGCT GGAAGCGATC GGCAAGGAGT TCGGCAAGAA GGTCTCGCTC  GCCGACCTGA TCGTGCTCGG CGGTGTCGCG GCGATCGAGA AGGCCGCCAA GGACGCCGGC GTCGCGGTCA AGGTGCCGTT CTCGCCGGGC CGCATGGACG CCTCGCAGGA GCAGACCGAC  GCGCCGTCCT TCGCGCCGCT GGAACCGCGC GCCGATGGCT TCCGCAACTA CATCAACAGC AAGAAGCACC AATTCATGAA GCCCGAAGAG GCTTTGGTGG ATCGGGCGCA GCTGTTGACG  TTGACCGCGC CGGAAATGAC CGTGCTGGTC GGCGGCCTGC GGGTGCTCGG CGCCAATGCG GGGGATTCCA AGCACGGCGT GTTCACCACC AAGCCGGGCA CGCTGAGCAA CGACTTCTTC  GTCAACCTGT TGACGATGGC GACGTCGTGG CAGCCCTCCG GGACGGAAGG CATCTATGAG GGCCGCGACC GCAAGTCGGG CGAAGTGAAG TGGACCGCGA CCCGCGTCGA CCTGATCTTC  GGCTCGCACT CGCAGCTGCG CGCGCTCGCC GAGGTCTATG CGCAGGCGGA TTCCAAAGAG AAGTTCGTCA ACGACTTCGT CGCCGCCTGG ACCAAGGTGA TGAACGCCGA CCGCTTCGAC 
CTCATCGCCG AGCCGGTGCT GCTGGAAGCC GCGGAG 

Retrieve as FASTA