Entry information : NwCP01_Nb-255
Entry ID 3657
Creation 2006-08-25 (Filippo Passardi)
Last sequence changes 2016-01-06 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-06 (Christophe Dunand)
Peroxidase information: NwCP01_Nb-255
Name NwCP01_Nb-255
Class Catalase peroxidase    [Orthogroup: CP001]
Taxonomy Bacteria Proteobacteria Alphaproteobacteria Bradyrhizobiaceae Nitrobacter
Organism Nitrobacter winogradskyi    [TaxId: 913 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NwCP01_Nb-255
start..stop
S start..stop
NhCP01_X14 1283 0 1..727 1..727
MspCP01_BNC1 1161 0 1..727 1..725
RpCP01_CGA009 1155 0 1..729 1..731
MnoCP01 1148 0 1..727 1..726
Literature and cross-references NwCP01_Nb-255
Literature Copeland,A. et al., CONSRTM US DOE Joint Genome Institute Direct Submission
(01-SEP-2005). Starkenburg,S.R. et al., Appl. Environ. Microbiol. 72 (3), 2050-2063 (2006)
Protein ref. GenBank:   ABA03298.1 UniProtKB:   Q3SWP3
DNA ref. GenBank:   74419069 (33243..35432)
Protein sequence: NwCP01_Nb-255
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   729
PWM (Da):   %s   79920.87  
PI (pH):   %s   5.02
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MDAKTNDGKA GQCPFTSGRG HKNRDWWPEQ LDVQVLHQKS NLSNPMGRDF DYASAFASLD LNAVIADLKA LMTDSQDWWP ADFGHYGGLM VRMAWHSAGT YRITDGRGGA GGGQQRFAPL  NSWPDNVLLD RARRLLWPIK QKYGRKISWA DLYVLAGNAA LESMGFKPLG FAGGRVDEWE PQELFWGPEG AWLGDERYSG ERELAEPLAA VQMGLIYVNP EGPNGQPDPL AAAKDIRETF  LRMAMNDEET VALIAGGHTF GKTHGAGDAS LVGPVPDSAP IEDQGLGWKG RFGTGKGADA IGSGLEVTWT QTPTKWDNNF FDTLFGFEWE LTKSPAGAHQ WRAKDAPAIT PDPFDESKKH  VPTMLTTDLS LRFDPIYGEI SKRFHENPDQ FADAFARAWF KLTHRDMGPR DRYLGPLVPK EVMIWQDPIP AVDHELVDDN DIADLKAKIL ASGCTVAQLV STAWASASTF RGSDKRGGAN  GARIRLAPQK DWEVNQPIQL KAVLAKLEEI QAEFNDAQTG GKKVSLADLI VLGGSAAVEK AARDAGIDLK VPFTPGRMDA SLDQTDVESF APLEPRADGF RNYISDRHQF MAPEEALVDR  AQLLNLTGPE MTVLVGGLRV LGANAADSRH GVFTTRPGKL TNDFFVNLLT MDTEWQPVAG QDGVYESRDR KTGTLKWTGT RVDLIFGSHS QLRAFAEVYA CADSGEKFAN DFAAAWAKVM 
NADRFDLKA 

Retrieve as FASTA  
Remarks Complete sequence from genomic. Strain="Nb-255 / ATCC 25391".
DNA
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCAA AGACAAATGA CGGAAAAGCG GGTCAATGCC CGTTCACGAG CGGTCGCGGA CACAAGAATC GCGACTGGTG GCCGGAGCAG CTCGATGTTC AGGTCCTTCA TCAGAAATCA  AACCTGTCCA ACCCGATGGG CCGGGACTTC GACTACGCCA GCGCGTTCGC AAGCCTCGAC CTGAACGCCG TCATCGCCGA TCTGAAGGCG CTGATGACGG ATTCGCAGGA CTGGTGGCCG  GCCGATTTCG GCCACTACGG CGGACTGATG GTCCGCATGG CATGGCATAG CGCGGGCACC TATCGCATCA CCGACGGCCG CGGCGGCGCC GGTGGCGGCC AGCAGCGTTT CGCGCCGCTG  AACTCCTGGC CGGACAACGT GCTGCTCGAC CGGGCGCGCC GCCTGTTGTG GCCGATCAAG CAGAAGTACG GCCGCAAGAT TTCCTGGGCC GACCTTTATG TCCTCGCGGG CAATGCCGCG  CTGGAATCGA TGGGTTTCAA GCCCTTGGGC TTCGCCGGCG GCCGTGTCGA CGAATGGGAG CCGCAGGAAT TGTTCTGGGG TCCGGAAGGC GCCTGGCTCG GCGACGAGCG CTACAGCGGC  GAACGTGAGC TGGCGGAGCC GCTCGCCGCG GTGCAGATGG GCCTGATCTA CGTCAATCCG GAAGGGCCGA ACGGCCAACC GGACCCGCTC GCTGCCGCCA AGGATATCCG CGAGACATTT  CTCCGCATGG CGATGAATGA CGAAGAAACC GTCGCGCTGA TCGCGGGCGG CCACACCTTC GGCAAGACCC ACGGCGCCGG CGACGCGTCG CTGGTCGGAC CGGTGCCGGA CTCCGCCCCG  ATCGAGGATC AGGGACTCGG CTGGAAGGGC CGGTTCGGCA CGGGCAAGGG GGCTGACGCA ATCGGCAGCG GCCTGGAAGT GACCTGGACC CAGACGCCGA CCAAGTGGGA CAACAACTTC  TTCGACACGC TGTTCGGGTT CGAATGGGAG CTGACCAAGA GCCCTGCCGG CGCGCACCAG TGGAGGGCGA AGGACGCTCC GGCCATCACC CCGGACCCCT TCGACGAGTC GAAGAAGCAC  GTGCCGACCA TGCTGACGAC GGATCTGTCG CTGCGCTTCG ATCCTATCTA CGGCGAAATC TCGAAGCGCT TCCATGAGAA TCCCGACCAG TTTGCGGACG CCTTCGCCCG CGCCTGGTTC  AAGCTGACCC ATCGCGACAT GGGACCCCGC GACCGCTATC TCGGCCCGCT GGTGCCAAAG GAAGTGATGA TCTGGCAGGA TCCGATCCCG GCCGTGGACC ATGAGTTGGT CGACGACAAC  GACATCGCCG ACCTGAAGGC GAAAATCCTC GCCTCCGGCT GCACCGTGGC GCAGCTGGTC TCGACCGCCT GGGCCTCGGC CTCCACCTTC CGCGGCTCCG ACAAGCGCGG CGGCGCCAAT  GGGGCGCGCA TCCGGCTTGC CCCGCAGAAG GATTGGGAGG TCAACCAGCC GATCCAGCTG AAAGCGGTGC TGGCGAAGCT CGAAGAGATC CAGGCCGAAT TCAATGACGC GCAGACAGGC  GGCAAAAAGG TCTCGCTCGC CGACCTGATC GTGCTCGGCG GATCGGCCGC GGTCGAGAAG GCGGCCAGAG ACGCCGGGAT CGACTTGAAG GTGCCATTCA CGCCCGGCCG CATGGATGCG  TCGCTGGACC AGACCGACGT GGAATCCTTC GCGCCGCTTG AGCCGCGCGC GGATGGCTTC CGCAACTACA TCAGCGACAG GCACCAGTTC ATGGCGCCCG AGGAGGCGCT GGTGGATCGC  GCGCAACTGC TGAACCTGAC CGGACCGGAG ATGACGGTTC TCGTCGGCGG CCTGCGCGTG CTGGGCGCCA ATGCCGCAGA CTCTAGGCAT GGCGTCTTCA CCACCCGCCC GGGCAAGCTG  ACGAACGACT TCTTTGTCAA CCTGCTCACC ATGGATACCG AGTGGCAACC GGTCGCCGGT CAGGACGGCG TTTACGAAAG CCGCGACCGC AAGACCGGCA CGCTGAAGTG GACGGGCACG  CGCGTCGACC TGATCTTCGG CTCGCACTCC CAGCTCCGCG CATTCGCGGA AGTCTATGCG TGCGCAGACT CCGGCGAGAA GTTCGCGAAC GACTTCGCCG CCGCATGGGC CAAGGTCATG 
AACGCCGATC GCTTCGATCT CAAGGCC 

Retrieve as FASTA  
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCAA AGACAAATGA CGGAAAAGCG GGTCAATGCC CGTTCACGAG CGGTCGCGGA CACAAGAATC GCGACTGGTG GCCGGAGCAG CTCGATGTTC AGGTCCTTCA TCAGAAATCA  AACCTGTCCA ACCCGATGGG CCGGGACTTC GACTACGCCA GCGCGTTCGC AAGCCTCGAC CTGAACGCCG TCATCGCCGA TCTGAAGGCG CTGATGACGG ATTCGCAGGA CTGGTGGCCG  GCCGATTTCG GCCACTACGG CGGACTGATG GTCCGCATGG CATGGCATAG CGCGGGCACC TATCGCATCA CCGACGGCCG CGGCGGCGCC GGTGGCGGCC AGCAGCGTTT CGCGCCGCTG  AACTCCTGGC CGGACAACGT GCTGCTCGAC CGGGCGCGCC GCCTGTTGTG GCCGATCAAG CAGAAGTACG GCCGCAAGAT TTCCTGGGCC GACCTTTATG TCCTCGCGGG CAATGCCGCG  CTGGAATCGA TGGGTTTCAA GCCCTTGGGC TTCGCCGGCG GCCGTGTCGA CGAATGGGAG CCGCAGGAAT TGTTCTGGGG TCCGGAAGGC GCCTGGCTCG GCGACGAGCG CTACAGCGGC  GAACGTGAGC TGGCGGAGCC GCTCGCCGCG GTGCAGATGG GCCTGATCTA CGTCAATCCG GAAGGGCCGA ACGGCCAACC GGACCCGCTC GCTGCCGCCA AGGATATCCG CGAGACATTT  CTCCGCATGG CGATGAATGA CGAAGAAACC GTCGCGCTGA TCGCGGGCGG CCACACCTTC GGCAAGACCC ACGGCGCCGG CGACGCGTCG CTGGTCGGAC CGGTGCCGGA CTCCGCCCCG  ATCGAGGATC AGGGACTCGG CTGGAAGGGC CGGTTCGGCA CGGGCAAGGG GGCTGACGCA ATCGGCAGCG GCCTGGAAGT GACCTGGACC CAGACGCCGA CCAAGTGGGA CAACAACTTC  TTCGACACGC TGTTCGGGTT CGAATGGGAG CTGACCAAGA GCCCTGCCGG CGCGCACCAG TGGAGGGCGA AGGACGCTCC GGCCATCACC CCGGACCCCT TCGACGAGTC GAAGAAGCAC  GTGCCGACCA TGCTGACGAC GGATCTGTCG CTGCGCTTCG ATCCTATCTA CGGCGAAATC TCGAAGCGCT TCCATGAGAA TCCCGACCAG TTTGCGGACG CCTTCGCCCG CGCCTGGTTC  AAGCTGACCC ATCGCGACAT GGGACCCCGC GACCGCTATC TCGGCCCGCT GGTGCCAAAG GAAGTGATGA TCTGGCAGGA TCCGATCCCG GCCGTGGACC ATGAGTTGGT CGACGACAAC  GACATCGCCG ACCTGAAGGC GAAAATCCTC GCCTCCGGCT GCACCGTGGC GCAGCTGGTC TCGACCGCCT GGGCCTCGGC CTCCACCTTC CGCGGCTCCG ACAAGCGCGG CGGCGCCAAT  GGGGCGCGCA TCCGGCTTGC CCCGCAGAAG GATTGGGAGG TCAACCAGCC GATCCAGCTG AAAGCGGTGC TGGCGAAGCT CGAAGAGATC CAGGCCGAAT TCAATGACGC GCAGACAGGC  GGCAAAAAGG TCTCGCTCGC CGACCTGATC GTGCTCGGCG GATCGGCCGC GGTCGAGAAG GCGGCCAGAG ACGCCGGGAT CGACTTGAAG GTGCCATTCA CGCCCGGCCG CATGGATGCG  TCGCTGGACC AGACCGACGT GGAATCCTTC GCGCCGCTTG AGCCGCGCGC GGATGGCTTC CGCAACTACA TCAGCGACAG GCACCAGTTC ATGGCGCCCG AGGAGGCGCT GGTGGATCGC  GCGCAACTGC TGAACCTGAC CGGACCGGAG ATGACGGTTC TCGTCGGCGG CCTGCGCGTG CTGGGCGCCA ATGCCGCAGA CTCTAGGCAT GGCGTCTTCA CCACCCGCCC GGGCAAGCTG  ACGAACGACT TCTTTGTCAA CCTGCTCACC ATGGATACCG AGTGGCAACC GGTCGCCGGT CAGGACGGCG TTTACGAAAG CCGCGACCGC AAGACCGGCA CGCTGAAGTG GACGGGCACG  CGCGTCGACC TGATCTTCGG CTCGCACTCC CAGCTCCGCG CATTCGCGGA AGTCTATGCG TGCGCAGACT CCGGCGAGAA GTTCGCGAAC GACTTCGCCG CCGCATGGGC CAAGGTCATG 
AACGCCGATC GCTTCGATCT CAAGGCC 

Retrieve as FASTA  
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGACGCAA AGACAAATGA CGGAAAAGCG GGTCAATGCC CGTTCACGAG CGGTCGCGGA CACAAGAATC GCGACTGGTG GCCGGAGCAG CTCGATGTTC AGGTCCTTCA TCAGAAATCA  AACCTGTCCA ACCCGATGGG CCGGGACTTC GACTACGCCA GCGCGTTCGC AAGCCTCGAC CTGAACGCCG TCATCGCCGA TCTGAAGGCG CTGATGACGG ATTCGCAGGA CTGGTGGCCG  GCCGATTTCG GCCACTACGG CGGACTGATG GTCCGCATGG CATGGCATAG CGCGGGCACC TATCGCATCA CCGACGGCCG CGGCGGCGCC GGTGGCGGCC AGCAGCGTTT CGCGCCGCTG  AACTCCTGGC CGGACAACGT GCTGCTCGAC CGGGCGCGCC GCCTGTTGTG GCCGATCAAG CAGAAGTACG GCCGCAAGAT TTCCTGGGCC GACCTTTATG TCCTCGCGGG CAATGCCGCG  CTGGAATCGA TGGGTTTCAA GCCCTTGGGC TTCGCCGGCG GCCGTGTCGA CGAATGGGAG CCGCAGGAAT TGTTCTGGGG TCCGGAAGGC GCCTGGCTCG GCGACGAGCG CTACAGCGGC  GAACGTGAGC TGGCGGAGCC GCTCGCCGCG GTGCAGATGG GCCTGATCTA CGTCAATCCG GAAGGGCCGA ACGGCCAACC GGACCCGCTC GCTGCCGCCA AGGATATCCG CGAGACATTT  CTCCGCATGG CGATGAATGA CGAAGAAACC GTCGCGCTGA TCGCGGGCGG CCACACCTTC GGCAAGACCC ACGGCGCCGG CGACGCGTCG CTGGTCGGAC CGGTGCCGGA CTCCGCCCCG  ATCGAGGATC AGGGACTCGG CTGGAAGGGC CGGTTCGGCA CGGGCAAGGG GGCTGACGCA ATCGGCAGCG GCCTGGAAGT GACCTGGACC CAGACGCCGA CCAAGTGGGA CAACAACTTC  TTCGACACGC TGTTCGGGTT CGAATGGGAG CTGACCAAGA GCCCTGCCGG CGCGCACCAG TGGAGGGCGA AGGACGCTCC GGCCATCACC CCGGACCCCT TCGACGAGTC GAAGAAGCAC  GTGCCGACCA TGCTGACGAC GGATCTGTCG CTGCGCTTCG ATCCTATCTA CGGCGAAATC TCGAAGCGCT TCCATGAGAA TCCCGACCAG TTTGCGGACG CCTTCGCCCG CGCCTGGTTC  AAGCTGACCC ATCGCGACAT GGGACCCCGC GACCGCTATC TCGGCCCGCT GGTGCCAAAG GAAGTGATGA TCTGGCAGGA TCCGATCCCG GCCGTGGACC ATGAGTTGGT CGACGACAAC  GACATCGCCG ACCTGAAGGC GAAAATCCTC GCCTCCGGCT GCACCGTGGC GCAGCTGGTC TCGACCGCCT GGGCCTCGGC CTCCACCTTC CGCGGCTCCG ACAAGCGCGG CGGCGCCAAT  GGGGCGCGCA TCCGGCTTGC CCCGCAGAAG GATTGGGAGG TCAACCAGCC GATCCAGCTG AAAGCGGTGC TGGCGAAGCT CGAAGAGATC CAGGCCGAAT TCAATGACGC GCAGACAGGC  GGCAAAAAGG TCTCGCTCGC CGACCTGATC GTGCTCGGCG GATCGGCCGC GGTCGAGAAG GCGGCCAGAG ACGCCGGGAT CGACTTGAAG GTGCCATTCA CGCCCGGCCG CATGGATGCG  TCGCTGGACC AGACCGACGT GGAATCCTTC GCGCCGCTTG AGCCGCGCGC GGATGGCTTC CGCAACTACA TCAGCGACAG GCACCAGTTC ATGGCGCCCG AGGAGGCGCT GGTGGATCGC  GCGCAACTGC TGAACCTGAC CGGACCGGAG ATGACGGTTC TCGTCGGCGG CCTGCGCGTG CTGGGCGCCA ATGCCGCAGA CTCTAGGCAT GGCGTCTTCA CCACCCGCCC GGGCAAGCTG  ACGAACGACT TCTTTGTCAA CCTGCTCACC ATGGATACCG AGTGGCAACC GGTCGCCGGT CAGGACGGCG TTTACGAAAG CCGCGACCGC AAGACCGGCA CGCTGAAGTG GACGGGCACG  CGCGTCGACC TGATCTTCGG CTCGCACTCC CAGCTCCGCG CATTCGCGGA AGTCTATGCG TGCGCAGACT CCGGCGAGAA GTTCGCGAAC GACTTCGCCG CCGCATGGGC CAAGGTCATG 
AACGCCGATC GCTTCGATCT CAAGGCC 

Retrieve as FASTA