Entry information : RnoGPx04-A
Entry ID 3733
Creation 2006-08-30 (Marcia Pinheiro Margis)
Last sequence changes 2006-08-30 (Marcia Pinheiro Margis)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-05-23 (Christophe Dunand)
Peroxidase information: RnoGPx04-A
Name RnoGPx04-A
Class Animal glutathione peroxidase    [Orthogroup: Gpx1002]
Taxonomy Eukaryota Metazoa Chordata Mammalia Muridae Rattus
Organism Rattus norvegicus (Norway rat)    [TaxId: 10116 ]
Cellular localisation Mitochondria
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RnoGPx04-A
start..stop
S start..stop
MmGPx04-A 407 8e-148 1..197 1..197
SscGPx04 389 1e-140 1..197 1..197
BtGPx04-A 384 5e-139 1..197 1..197
PpyGPx04-A 381 9e-138 1..197 1..197
Literature and cross-references RnoGPx04-A
Literature Pushpa-Rekha T.R., Burdsall A.L., Oleksa L.M., Chisolm G.M., Driscoll D.M. Rat phospholipid-hydroperoxide glutathione peroxidase. cDNA cloning and identification of multiple transcription and translation start sites. J. Biol. Chem. 270:26993-26999(1995).
Protein ref. UniProtKB:   P36970
Cluster/Prediction ref. UniGene:   Rn.3647
Protein sequence: RnoGPx04-A
Sequence Properties
first value : protein
second value (mature protein)
Length (aa): %sProtein length in amino acid 197 (172)
PWM (Da): %sMolecular Weight of protein
Protein Mw is calculated by the addition of average isotopic masses
of amino acids in the protein and the average isotopic mass of one water molecule.
Molecular weight values are given in Dalton (Da).
22049.81 (19475.4)  
PI (pH): %sIso electric point of protein
Calculation done with EMBOSS parameters.
Please see Dataset for pKi calculation for more information
8.42 (8.04) Peptide Signal: %sProtein signal for mature protein.
if exist :cut position of signal peptide.
range: start-end pos of mature protein
cut: 26 range:26-197
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSWGRLSRLL KPALLCGALA VPGLAGTMCA SRDDWRCARS MHEFAAKDID GHMVCLDKYR GCVCIVTNVA SQCGKTDVNY TQLVDLHARY AECGLRILAF PCNQFGRQEP GSNQEIKEFA 
AGYNVRFDMY SKICVNGDDA HPLWKWMKVQ PKGRGMLGNA IKWNFTKFLI DKNGCVVKRY GPMEEPQVIE KDLPCYL 

Retrieve as FASTA  
Remarks Alternative products produced by alternative splicing and alternative initiation (RnoGPx04-A, B and C). Globally (RnoGPx04-A, B and C), there are 100 ESTs and 8 cDNA of the three trasncripts (see UniGene accession).