Entry information : NtPrx13-1A_ALT301 (NtPOX2 / NtPrx13a _ALT301)
Entry ID 3767
Creation 2006-08-25 (Christophe Dunand)
Last sequence changes 2011-04-12 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2011-04-12 (Christophe Dunand)
Peroxidase information: NtPrx13-1A_ALT301 (NtPOX2 / NtPrx13a _ALT301)
Name (synonym) NtPrx13-1A_ALT301 (NtPOX2 / NtPrx13a _ALT301)
Class Class III peroxidase    [Orthogroup: Prx056]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Nicotiana
Organism Nicotiana tabacum    [TaxId: 4097 ]
Cellular localisation N/D
Tissue type Cell culture
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NtPrx13-1A_ALT301
start..stop
S start..stop
NtPrx12-1A 723 0 1..360 1..360
NtPrx12-1B 675 0 1..360 1..360
NtPrx13-1A 666 0 32..360 1..329
NtPrx27-1A 582 0 1..360 1..358
Literature and cross-references NtPrx13-1A_ALT301 (NtPOX2 / NtPrx13a _ALT301)
Literature Nozawa A., Yamamoto Y., Devi R.S., Tanaka H., Matsumoto H. Isolation and characterization of a peroxidase gene over-expressed in an aluminum-tolerant cultured cell line
Protein ref. UniProtKB:   Q50LG4
mRNA ref. GenBank:   AB178954.1
Protein sequence: NtPrx13-1A_ALT301 (NtPOX2 / NtPrx13a _ALT301)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   360 (340)
PWM (Da):   %s   38374.22 (36282.0) Transmb domain:   %s   i7-29o
PI (pH):   %s   6.5 (5.78) Peptide Signal:   %s   cut: 21 range:21-360
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MAFRLSHLSL ALSLLALALA GVAIYRNTYE AMSKGFQTLS PELDLLESAA SILTLDNNNA EQNSDSKLTQ PLSPSACIFT AVRGVVNSAI DRERRMGASL IRLHFHDCFV DGCDGGVLLD  DIPGSFQGEK TSPPNNNSAR GFEVIEQAKQ RVKDTCPNTP VSCADILAIA ARDSVVKLGG QGYNVALGRR DARAANFTGA LTQLPAPFDN LTVQIRKFND KNFNAREMVA LAGAHTVGFT  RCATACNSNN VNPAARLQCN CSVTQNDTNL QQLDTTPAVF DRVYFQDLSR NQGILFSDQV LTGNTTTAAI VTTYSNNGAV FLGDFAAAMI KMGNLPPSPG VQLEIRDVCS RVNPSSVASM 

Retrieve as FASTA  
Remarks Complete sequence from cDNA. cell_line="ALT301". No EST.
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTTTTC GTTTGAGTCA TTTGAGCCTT GCCCTGAGCC TTTTGGCTCT TGCACTTGCA GGTGTTGCCA TTTATAGGAA CACTTATGAA GCCATGAGTA AGGGATTCCA AACACTTTCT  CCAGAGTTAG ATCTGCTGGA GTCAGCAGCC AGCATTTTAA CCCTAGATAA TAATAATGCT GAGCAAAATT CAGACAGCAA GTTAACTCAA CCATTATCTC CATCGGCATG CATCTTCACG  GCTGTTCGAG GAGTTGTGAA CAGTGCAATT GATAGAGAAA GGCGCATGGG AGCTTCTCTC ATTCGTCTCC ACTTCCATGA CTGCTTTGTT GATGGTTGCG ATGGAGGAGT TCTTCTAGAC  GATATTCCCG GATCATTCCA AGGGGAAAAG ACCTCACCAC CCAACAACAA CTCAGCCAGA GGTTTTGAAG TCATAGAACA AGCTAAACAA AGAGTAAAAG ATACTTGTCC CAACACGCCT  GTATCTTGCG CAGACATCTT AGCTATTGCT GCTCGTGATT CTGTTGTTAA ACTAGGAGGA CAAGGCTATA ACGTTGCACT TGGGAGAAGA GATGCAAGAG CGGCCAACTT CACTGGTGCT  TTAACTCAGC TTCCAGCTCC GTTCGACAAT CTAACCGTCC AAATAAGAAA ATTTAATGAC AAAAACTTTA ATGCCCGGGA AATGGTGGCG CTAGCCGGTG CCCACACGGT GGGTTTCACC  AGGTGCGCCA CCGCGTGCAA CAGCAACAAC GTTAACCCAG CGGCACGTCT TCAATGCAAC TGCTCCGTCA CCCAAAACGA CACCAACTTG CAACAACTGG ATACAACTCC TGCTGTGTTC  GACAGAGTTT ACTTCCAGGA CTTAAGCAGG AACCAGGGCA TACTTTTCTC GGATCAAGTG TTGACGGGGA ATACCACCAC TGCTGCTATT GTTACGACCT ACAGCAATAA TGGTGCTGTT  TTCCTGGGAG ATTTTGCTGC TGCTATGATC AAGATGGGAA ACTTGCCTCC CTCACCGGGC GTTCAATTGG AAATTCGTGA TGTTTGTAGC AGGGTCAATC CCAGCTCTGT GGCTTCTATG 
TGA 

Retrieve as FASTA