Entry information : LeAPx09 (Solyc04g074640.2.1[2.3])
Entry ID 3921
Creation 2006-09-22 (Filippo Passardi)
Last sequence changes 2006-09-22 (Filippo Passardi)
Sequence status complete
Reviewer Messaoudi
Last annotation changes 2014-08-22 (Messaoudi)
Peroxidase information: LeAPx09 (Solyc04g074640.2.1[2.3])
Name (synonym) LeAPx09 (Solyc04g074640.2.1[2.3])
Class Ascorbate peroxidase    [Orthogroup: APx004]
Taxonomy Eukaryota Viridiplantae Streptophyta Solanaceae Solanum
Organism Lycopersicon esculentum (Tomato)    [TaxId: 4081 ]
Cellular localisation Thylakoid lumen
Tissue types Flowers
Shoot meristems
Shoots
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value LeAPx09
start..stop
S start..stop
NtAPx09-1A 610 0 1..345 1..346
PpeAPx05 535 0 2..345 3..349
VvAPx07 521 0 2..345 3..344
CclAPx01 514 0 3..345 4..349
Literature and cross-references LeAPx09 (Solyc04g074640.2.1[2.3])
Literature Kieselbach,T., Bystedt,M., Hynds,P., Robinson,C. and Schroder,W.P. A peroxidase homologue and novel plastocyanin located by proteomics to the Arabidopsis chloroplast thylakoid lumen. FEBS Lett. 480 (2-3), 271-276 (2000).
Protein ref. UniProtKB:   Q9THX6
mRNA ref. GenBank:   AJ251882.1
Protein sequence: LeAPx09 (Solyc04g074640.2.1[2.3])
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   345
PWM (Da):   %s   37613.39  
PI (pH):   %s   8
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVSFASTLPS LVSFIPSPSS ITNASRNPPQ PGMICCKFRS ELNNEDRFHR RDILQSVGAA VGMDLIARSS AFIEVANAAD LIQRRQRSDF QSKIKLTLYD AIKANPDIIP SLLTLALNDA  ITYDKATKTG GPNGSIRFSS EISRPENKGL DAALNLLEES KKVIDLDSKG GPISYADLIQ FAAQSAVKST FIASAISKCG GNVEKGTLLY SAYGSNGQWG QFDRIFGRSD AQEPDPEGRV 
PQWDKASVQE MKDKFKAVGL GPRQLAVMSS FLGPDQAATE ALLASDPEVL PWIQKYQRSR ETVSRTDYEV DLITTVTKLS SLGQVINYEA YTYPPRKIDV TKLKL 

Retrieve as FASTA  
Remarks Complete sequence from 10 EST sequences. According to Teixeira FK et al. (J.Mol.Evol. (2004) pp. 761-770), it is not an APx, as it lacks heme-binding site, active site and is more distant to other APx proteins than CCP.
DNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTCTCTT TTGCTTCAAC ACTTCCCTCT TTGGTTTCAT TCATTCCTTC ACCATCTTCC ATTACCAATG CCTCAAGAAA CCCTCCTCAA CCTGGTATGA TTTGTTGTAA GTTTAGATCA  GAGCTTAATA ATGAAGATCG CTTTCATAGA CGTGATATTC TTCAATCTGT TGGAGCAGCA GTAGGCATGG ACTTGATAGC AAGATCGAGT GCATTCATCG AAGTAGCTAA TGCTGCTGAT  TTAATACAAC GCAGACAGCG GTCAGATTTT CAATCAAAGA TCAAACTGAC TCTTTATGAT GCTATAAAGG CAAATCCGGA TATAATTCCA TCCTTACTAA CTTTAGCACT TAACGATGCC  ATAACATATG ATAAGGCAAC AAAAACCGGG GGTCCCAATG GATCCATACG TTTCAGCTCA GAGATCAGCA GACCAGAAAA TAAGGGGCTT GATGCTGCTT TGAATTTGTT GGAGGAATCA  AAGAAGGTTA TTGATTTAGA TTCCAAAGGT GGACCAATCT CATATGCAGA TCTCATCCAA TTTGCTGCAC AAAGTGCAGT CAAATCGACC TTTATCGCTT CTGCAATTAG CAAATGTGGT  GGTAATGTAG AGAAGGGGAC TTTGTTGTAC TCTGCATATG GTTCTAATGG ACAGTGGGGC CAATTTGATA GGATATTCGG GAGGTCAGAT GCCCAGGAGC CTGATCCAGA GGGAAGGGTG  CCTCAGTGGG ATAAAGCAAG TGTGCAGGAA ATGAAAGACA AGTTCAAAGC TGTTGGCTTG GGCCCTCGTC AGTTAGCAGT AATGTCTTCA TTCTTGGGTC CTGATCAAGC TGCAACAGAG  GCCCTACTCG CCAGTGATCC AGAAGTTCTT CCTTGGATTC AGAAGTACCA AAGGAGCAGG GAAACAGTGT CTCGAACTGA TTATGAGGTT GACTTGATTA CTACTGTTAC AAAATTAAGC 
AGTTTGGGAC AAGTAATAAA CTATGAGGCA TATACTTATC CTCCCAGGAA AATTGATGTT ACCAAACTCA AGTTGTAGAA AGGTGGAAGC 

Retrieve as FASTA