Entry information : KmAPx01
Entry ID 3944
Creation 2006-09-22 (Filippo Passardi)
Last sequence changes 2011-05-04 (Christophe Dunand)
Sequence status partial
Reviewer Not yet reviewed
Last annotation changes 2011-05-04 (Christophe Dunand)
Peroxidase information: KmAPx01
Name KmAPx01
Class Ascorbate peroxidase     [Orthogroup: APx002]*
Taxonomy Eukaryota Dinophyceae Gymnodiniaceae Karlodinium
Organism Karlodinium micrum    [TaxId: 407301 ]
Cellular localisation Chloroplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value KmAPx01
start..stop
S start..stop
HtrAPx01 452 5e-161 37..336 35..338
OmarAPx01 445 1e-158 41..329 20..306
SsAPx04_AU1 310 6e-104 36..336 84..351
MpuAPx01 306 9e-104 38..335 37..336
Literature and cross-references KmAPx01
Literature Patron,N.J., Waller,R.F. and Keeling,P.J. A tertiary plastid uses genes from two endosymbionts; J. Mol. Biol. 357 (5), 1373-1382 (2006)
Protein ref. UniProtKB:   Q2IA51
mRNA ref. GenBank:   DQ118600.1 [3' end]
Protein sequence: KmAPx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   336
PWM (Da):   %s   36384.72  
PI (pH):   %s   7.16
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
HYYDLFLGKD DLNHSAADFG SFVVFGNTSG GLSPKDELEA CQKELKELIN KLNCNPILVR LAWHDSGTFD QRITNFPQRG GANGAIRFDP EMTMGANAGL SKARGYLEKI KAKYPKVSWA  DLIQMASATA IECAGGPKVP MKYGRVDVTG PEQCAGPTSR EGFGGNAGLP DAKPPFGCGA SSAAQHLRNV FTKKMGFTDQ EIVALSGAHT IGRAFKDRSG TCPFGYGGAS ASKYTKADCI 
VRCDGKAGIG MEGGAGWTKN WLTFDNSYYT AYKESMADDQ LLWFPTDEAL HTDEAFKVHF YKYAQDKQAF FDDYAKAHKK LSELGCKFEP AEGITL 

Retrieve as FASTA  
Remarks Partial sequence from mRNA. Short 5'end is missing.
CDS
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.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
CATTATTATG ACCTCTTCTT GGGCAAAGAT GATCTTAATC ATTCTGCGGC CGACTTTGGG TCGTTCGTCG TCTTTGGGAA CACTTCGGGT GGTCTGTCTC CTAAAGATGA GCTTGAAGCG  TGCCAGAAAG AGCTCAAGGA ACTCATCAAC AAGTTGAATT GCAACCCTAT TTTGGTGCGT TTGGCTTGGC ACGATTCTGG CACTTTCGAT CAACGTATCA CGAACTTTCC ACAGCGAGGA  GGTGCTAATG GTGCTATCCG GTTCGATCCC GAAATGACCA TGGGTGCAAA TGCTGGTTTG TCGAAGGCGA GGGGCTATCT TGAGAAAATT AAGGCGAAAT ATCCGAAAGT CTCTTGGGCT  GACCTTATTC AGATGGCATC GGCAACTGCC ATCGAGTGCG CAGGTGGTCC AAAAGTTCCC ATGAAGTATG GCCGCGTTGA TGTGACAGGG CCCGAGCAGT GCGCGGGACC AACTTCTCGC  GAGGGTTTTG GAGGAAATGC AGGTTTGCCT GATGCAAAGC CACCATTTGG TTGTGGTGCA TCTTCCGCAG CTCAGCATCT TCGCAACGTC TTCACCAAGA AGATGGGCTT CACAGATCAG  GAAATCGTTG CATTATCAGG TGCACACACG ATTGGTCGCG CTTTCAAGGA TCGAAGTGGA ACATGCCCAT TTGGTTATGG CGGTGCAAGC GCATCGAAGT ATACAAAGGC CGATTGTATT  GTCCGGTGCG ATGGAAAAGC AGGCATTGGC ATGGAAGGAG GTGCAGGGTG GACCAAGAAT TGGTTGACAT TTGACAACAG CTACTACACT GCATACAAGG AGTCGATGGC CGACGATCAG  CTTTTGTGGT TTCCAACAGA CGAAGCTCTT CATACGGATG AGGCCTTCAA AGTGCATTTC TACAAGTACG CTCAAGATAA GCAGGCATTC TTTGATGACT ACGCAAAGGC GCACAAAAAG 
TTGTCTGAAT TGGGCTGCAA GTTCGAACCT GCTGAGGGCA TTACTTTGTG A 

Retrieve as FASTA