Entry information : RnoPGHS01
Entry ID 3974
Creation 2006-09-08 (Christophe Dunand)
Last sequence changes 2006-09-08 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2006-09-08 (Filippo Passardi)
Peroxidase information: RnoPGHS01
Name RnoPGHS01
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Muridae Rattus
Organism Rattus norvegicus (Norway rat)    [TaxId: 10116 ]
Cellular localisation N/D
Tissue types Adipose tissue
Cartilage
Kidney
Lung
Male genital
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RnoPGHS01
start..stop
S start..stop
MmPGHS01 1145 0 27..602 27..602
EcabPGHS01 1063 0 27..602 24..599
OcuPGHS01 1062 0 27..602 31..606
HsPGHS01 1061 0 27..602 24..599
Literature and cross-references RnoPGHS01
Literature Feng L., Sun W., Xia Y., Tang W.W., Chanmugam P., Soyoola E., Wilson C.B., Hwang D.;
"Cloning two isoforms of rat cyclooxygenase: differential regulation of their expression.";
Arch. Biochem. Biophys. 307:361-368(1993).
Protein ref. UniProtKB:   Q63921
Cluster/Prediction ref. UniGene:   Rn.44404
Protein sequence: RnoPGHS01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   602 (576)
PWM (Da):   %s   68874.71 (65953.9)  
PI (pH):   %s   6.78 (6.60) Peptide Signal:   %s   cut: 27 range:27-602
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSRRSLSLQF PLLLLLLLLP PPPVLLTDAG VPSPVNPCCY YPCQNQGVCV RFGLDHYQCD CTRTGYSGPN CTIPEIWTWL RSSLRPSPSF THFLLTHGYW IWEFVNATFI REVLMRLVIT  VRSNLIPSPP TYNTAHDYIS WESFSNVSYY TRILPSVPKD CPTPMGTKGK KQLPDIHLLA QRLLLRREFI PGPQGTNVLF AFFAQHFTHQ FFKTSGKMGP GFTKALGHGV DLGHIYGDSL  ERQYHLRLFK DGKLKYQVLD GEVYPPSVEQ ASVLMRYPPG VPPEKQMAVG QEVFGLLPGL MLFSTIWLRE HNRVCDLLKE EHPTWDDEQL FQTTRLILIG ETIKIIIEEY VQHLSGYFLQ  LKFDPELLFR AQFQYRNRIA LEFNHLYHWH PLMPDSFQVG SQEYSYEQFL FNTSMLVDYG VEALVDAFSR QRAGRIGGGR NFDYHVLHVA EDVIKESREM RLQSFNEYRK RFGLKPYTSF  QEFTGEKEMA AELEELYGDI DALEFYPGLM LEKCQPNSLF GESMIEMGAP FSLKGLLGNP ICSPEYWKPS TFGGDVGFNI VNTASLKKLV CLNTKTCPYV SFRVPDYPGD DGSVFVRPST 
EL 

Retrieve as FASTA  
Remarks Complete sequence from 7 cDNA and 19 ESTs. Strain="Fischer 344, Strain=Sprague-Dawley".