Entry information : RnoPGHS02-A
Entry ID 3975
Creation 2006-09-08 (Christophe Dunand)
Last sequence changes 2006-09-08 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2012-05-23 (Christophe Dunand)
Peroxidase information: RnoPGHS02-A
Name RnoPGHS02-A
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Muridae Rattus
Organism Rattus norvegicus (Norway rat)    [TaxId: 10116 ]
Cellular localisation N/D
Tissue types Eye
Hypothalamus
Male genital
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value RnoPGHS02-A
start..stop
S start..stop
ShiPGHS02 1194 0 1..604 1..604
CfaPGHS02 1159 0 1..604 1..604
OcuPGHS02 1145 0 15..604 15..604
EcabPGHS02 1137 0 15..604 15..604
Literature and cross-references RnoPGHS02-A
Literature Kennedy B.P., Chan C.C., Culp S.A., Cromlish W.A. Cloning and expression of rat prostaglandin endoperoxide synthase (cyclooxygenase)-2 cDNA. Biochem. Biophys. Res. Commun. 197:494-500(1993).
Protein ref. UniProtKB:   P35355
mRNA ref. GenBank:   AF233596.1
Cluster/Prediction ref. UniGene:   Rn.44369
Protein sequence: RnoPGHS02-A
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   604 (587)
PWM (Da):   %s   69006.8 (67225.8)  
PI (pH):   %s   7.6 (7.45) Peptide Signal:   %s   cut: 18 range:18-604
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MLFRAVLLCA ALALSHAANP CCSNPCQNRG ECMSIGFDQY KCDCTRTGFY GENCTTPEFL TRIKLLLKPT PNTVHYILTH FKGVWNIVNN IPFLRNSIMR YVLTSRSHLI DSPPTYNVHY  GYKSWEAFSN LSYYTRALPP VADDCPTPMG VKGNKELPDS KEVLEKVLLR REFIPDPQGT NMMFAFFAQH FTHQFFKTDQ KRGPGFTRGL GHGVDLNHVY GETLDRQHKL RLFQDGKLKY  QVIGGEVYPP TVKDTQVDMI YPPHVPEHLR FAVGQEVFGL VPGLMMYATI WLREHNRVCD ILKQEHPEWD DERLFQTSRL ILIGETIKIV IEDYVQHLSG YHFKLKFDPE LLFNQQFQYQ  NRIASEFNTL YHWHPLLPDT FNIEDQEYTF KQFLYNNSIL LEHGLAHFVE SFTRQIAGRV AGGRNVPIAV QAVAKASIDQ SREMKYQSLN EYRKRFSLKP YTSFEELTGE KEMAAELKAL  YHDIDAMELY PALLVEKPRP DAIFGETMVE LGAPFSLKGL MGNPICSPQY WKPSTFGGEV GFRIINTASI QSLICNNVKG CPFASFNVQD PQPTKTATIN ASASHSRLDD INPTVLIKRR 
STEL 

Retrieve as FASTA  
Remarks Complete sequence from cDNA and 21 ESTs. Strain="Wistar" and "Fisher".