Entry information : CloPrx04
Entry ID 3995
Creation 2010-04-30 (Christophe Dunand)
Last sequence changes 2010-04-30 (Christophe Dunand)
Sequence status complete
Reviewer Not yet reviewed
Last annotation changes 2010-04-30 (Christophe Dunand)
Peroxidase information: CloPrx04
Name CloPrx04
Class Class III peroxidase    [Orthogroup: Prx013]
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Zingiberaceae Curcuma
Organism Curcuma longa    [TaxId: 136217 ]
Cellular localisation N/D
Tissue type Young leaves
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CloPrx04
start..stop
S start..stop
CloPrx03 513 0 1..318 1..317
CpapPrx28 342 5e-118 15..318 16..329
EgrPrx43 337 4e-116 14..318 8..321
OsPrx34 334 5e-115 17..318 17..322
Literature and cross-references CloPrx04
Literature Ma,X.Q., Koo,H.J., Haller,K.P., Soderlund,C.A. and Gang,D.R. Comparative Analysis of Expressed Sequence Tags from Different Organs of Ginger and Turmeric. Insights into Specialized Metabolism in Traditional Medicinal Plants Unpublished (2006)
EST ref. GenBank:   DY384586.1 [5' end]   DY384587.1 [3' end]
Protein sequence: CloPrx04
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   318 (291)
PWM (Da):   %s   34840.74 (32024.3)  
PI (pH):   %s   7.78 (7.50) Peptide Signal:   %s   cut: 28 range:28-318
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MALARGTMLA VFAMAVLWVS GVQRADAQLR VGYYSDSCPR AEAIVKEEVE KALKDDEGVG ADLLRMHFHD CFVRGCDGSI FLDSTNTSKA EKDAPINLTL EGFEIIDDIK EKLEAACKGV  VSCADLLAFA ARDAVVHYGG IHYKVPSGRR DSRISIESDA KVLPSPDFKL ARLTDLFISK GLSQTDMVIL SGAHTVGIAH CDAFSDRLDS HDPTLDAKYA RALRNQCPPL SNNTVPMDPK 
TPHKFDNRYY RLVLENRGLF TSDHTLISTQ GTTTLVKRLG GNYKRFQRKF AQSIVKMGAI GVLTGYDGEV RSNCRVVN 

Retrieve as FASTA  
Remarks Partial sequence from 4 ESTs. DY384586 (5') and DY384587, DY392754, DY392753 (3'). Cultivar="Orange Turmeric".
cDNA
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GCATGACGGT GGACGATCGA GATAGAGAGA AATCAGCAAT GGCGCTTGCT AGAGGAACCA TGCTGGCGGT CTTCGCCATG GCCGTTTTGT GGGTTAGTGG CGTGCAGAGA GCAGACGCCC  AGCTCAGGGT CGGGTACTAC TCCGACAGTT GCCCTCGAGC TGAGGCCATC GTCAAGGAGG AGGTCGAGAA AGCCCTCAAG GATGACGAAG GAGTCGGCGC TGACCTTCTC AGAATGCATT  TCCATGATTG CTTCGTCAGA GGCTGCGATG GTTCAATTTT CTTGGATTCC ACCAACACGA GCAAAGCCGA AAAGGACGCC CCGATCAACC TCACGCTCGA GGGATTCGAA ATTATAGACG  ATATTAAGGA GAAACTGGAA GCCGCCTGCA AAGGAGTCGT CTCCTGTGCC GACCTCCTCG CATTTGCCGC CAGAGACGCC GTTGTTCATT ATGGAGGAAT CCACTACAAG GTGCCTTCAG  GGAGGAGAGA TAGCCGGATC TCCATTGAGT CGGACGCCAA AGTCCTCCCT TCGCCGGACT TCAAGCTCGC CAGGCTCACC GACTTGTTCA TCTCCAAAGG CTTGAGCCAG ACCGACATGG  TCATCCTCTC CGGAGCCCAC ACGGTGGGCA TTGCGCACTG CGACGCCTTC TCCGATCGGT TGGATTCCCA CGACCCGACG CTAGACGCCA AGTACGCGAG GGCGTTGCGG AATCAGTGCC  CGCCGCTGAG CAACAACACG GTGCCGATGG ACCCGAAGAC GCCGCATAAA TTCGACAACC GCTACTACCG CCTCGTGCTC GAAAACCGCG GCCTCTTCAC CTCCGACCAC ACGCTGATCT  CCACGCAGGG CACCACCACC CTGGTCAAGC GCCTCGGGGG AAACTATAAG CGTTTCCAGC GCAAGTTCGC CCAGTCCATC GTCAAGATGG GCGCCATCGG CGTCCTCACC GGCTACGACG  GCGAGGTTCG TAGCAACTGC AGAGTCGTCA ACTGAACGAC GAACACAACA ATTGCGGAGC CGGCCACTCG TCTGTGATTG ATTCTACGTG TGCACCTATT TGTTCTCTTC GTGCTGCAAG 
GATTACGATT CGTGCATGTT TC 

Retrieve as FASTA