Entry information : CloPrx07
Entry ID 3998
Creation 2006-09-20 (Christophe Dunand)
Last sequence changes 2006-09-20 (Christophe Dunand)
Sequence status partial
Reviewer Filippo Passardi
Last annotation changes 2008-04-25 (Christophe Dunand)
Peroxidase information: CloPrx07
Name CloPrx07
Class Class III peroxidase     [Orthogroup: Prx024]*
Taxonomy Eukaryota Viridiplantae Streptophyta Monocotyledons Zingiberaceae Curcuma
Organism Curcuma longa    [TaxId: 136217 ]
Cellular localisation N/D
Tissue type Rhizomes
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CloPrx07
start..stop
S start..stop
EgrPrx62 384 2e-133 2..326 6..325
EguPrx62 384 2e-133 2..326 6..325
EcamPrx146 381 3e-133 26..329 24..323
EcamPrx62 381 7e-133 2..326 6..325
Literature and cross-references CloPrx07
Literature Ma,X.Q., Koo,H.J., Haller,K.P., Soderlund,C.A. and Gang,D.R. Comparative Analysis of Expressed Sequence Tags from Different Organs of Ginger and Turmeric. Insights into Specialized Metabolism in Traditional Medicinal Plants Unpublished (2006)
EST ref. GenBank:   DY391553 [5' end]   DY390290 [3' end]
Protein sequence: CloPrx07
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   345 (319)
PWM (Da):   %s   36239.68 (33826.3)  
PI (pH):   %s   6.51 (6.74) Peptide Signal:   %s   cut: 27 range:27-345
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
GAASVSGLAL VVLVLVLLDA ASVSHAQLQV GFYVGKCKGT DVEAVIRGIV QARFKLDPSI LPALLRMQFH DCFVRGCDAS ILLDGPSSEK KAGANASVRG YELIDEIKAA LEKACPGVVS  CADIIVAATR DTVVLGGGTR YEVQTGRRDG LRSSVDDVNL PGPGISVSSA MGFFNAKKIS TEDMVLLLGG HTVGITHCFF ISDRLWNFNG LGGPDPSMDP ALVRSLRVTC PQNGDGDNNP 
VNLDQNATSA NVVDNSFFKQ IMAKRGVLQI DQRLADDGQT RSTVAGLAAD KLNFGKRFGG AMVKMGAIEV LTGSQGEIRK SCRAVNKRSV EAALEEIVDG LLEAQ 

Retrieve as FASTA  
Remarks Partial sequence from 3 EST. DY391553 (5') and DY390290, DY392754, DY392753 (3'). Short PS is missing. Cultivar="Orange Turmeric".