Entry information : PtaPrx53
Entry ID 4016
Creation 2006-09-28 (Christophe Dunand)
Last sequence changes 2006-09-28 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2010-05-04 (Christophe Dunand)
Peroxidase information: PtaPrx53
Name PtaPrx53
Class Class III peroxidase    [Orthogroup: Prx026]
Taxonomy Eukaryota Viridiplantae Streptophyta Pinaceae Pinus
Organism Pinus taeda (loblolly pine)    [TaxId: 3352 ]
Cellular localisation N/D
Tissue type Seedlings
Inducers Flooded treatment
Sulfur deficience
Repressor N/D
Best BLASTp hits
Perox score E-value PtaPrx53
start..stop
S start..stop
PabPrx169 615 0 1..326 1..326
GbPrx11 485 1e-174 1..324 1..326
PabPrx72 466 4e-167 21..324 21..325
LuPrx82 434 2e-154 11..324 15..327
Literature and cross-references PtaPrx53
Literature Pratt,L., Cordonnier-Pratt,M.-M., Lorenz,W.W., Zimmermann,C., Johnson,H., Anfuso,C., Kamran,D., Chhabra,D. and Dean,J.F.D. A loblolly pine (Pinus taeda) EST database from flooded roots. Unpublished (2004)
EST ref. GenBank:   CO160524.1 [5' end]   CO368993.1 [3' end]
Protein sequence: PtaPrx53
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   326 (308)
PWM (Da):   %s   36370.99 (34502.9)  
PI (pH):   %s   4.79 (4.78) Peptide Signal:   %s   cut: 24 range:19-326
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVRIELLGIS VLLVCTAGIT CTAQQTELME GYYQTLCPSA EDTIREQVDK LYHEHGNTAV SWLRTIFHDC MVESCDASIL LENTPNLVSE QQSERNFGMR NFKFLNTIKN AVEEECPGVV  SCADIIALAT REGTVMLGGP RIALKTGRRD SLQSSAAVTD KYMPLHNDTI DTVLDRFESM GIDAEGTVAL LGAHTVGRTH CVNLVNRLYP TVDPSIDPDY AEYLKKRCPT PNPEPTEVLY 
SRNDPGTPMK FDNNYYKNLI ANKGLLLIDQ RLLSDNRTSD YVNRMAQDND YFFTQFGRAL IILSENNPLT GSLGEIRKDC RYVNSL 

Retrieve as FASTA  
Remarks Complete sequence from 14 CO160524, DR112423, BX676795, CO164811, DR088951, CO167831, DR166844 (5') and CO368993, CO163727, DR088869, CO164737, CO160457, DR052510, CO363037 (3')