Entry information : OsPrxII0501 (OsPrxIIE01)
Entry ID 4018
Creation 2006-10-30 (Nicolas Rouhier)
Last sequence changes 2006-10-30 (Nicolas Rouhier)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-08-04 (Christophe Dunand)
Peroxidase information: OsPrxII0501 (OsPrxIIE01)
Name (synonym) OsPrxII0501 (OsPrxIIE01)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation Chloroplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrxII0501
start..stop
S start..stop
SbPrxII01 332 5e-117 4..232 2..233
ZmPrxII0501 313 2e-109 70..232 69..233
ScPrxII05 306 4e-107 16..232 1..211
OsPrxII0502 295 2e-102 69..232 61..225
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 24830496..24831194 699  
join(24830496..24831194)


exon

Literature and cross-references OsPrxII0501 (OsPrxIIE01)
Literature Dietz et al The function of peroxiredoxins in plant organelle redox metabolism. J Exp Bot. 2006;57(8):1697-709.
Protein ref. UniProtKB:   Q69TY4
DNA ref. GenBank:   NC_008399.1 (24830496..24831191)
Cluster/Prediction ref. UniGene:   Os.9313
Protein sequence: OsPrxII0501 (OsPrxIIE01)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   232
PWM (Da):   %s   23560.49  
PI (pH):   %s   9.21
Sequence
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Send to Peroxiscan
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MAAAASTLAS LSATAAAAAG KRLLLSSPSR SLSLSLASRG RIAVMPHLRA GILSAAPRRA VSASAPAAAT IAVGDKLPDA TLSYFDSPDG ELKTVTVRDL TAGKKVVLFA VPGAFTPTCT 
QKHVPGFVAK AGELRAKGVD AVACVSVNDA FVMRAWKESL GVGDEVLLLS DGNGELARAM GVELDLSDKP AGLGVRSRRY ALLAEDGVVK VLNLEEGGAF TTSSAEEMLK AL 

Retrieve as FASTA  
Remarks Complete sequence from genomic (chromo 6, no intron), 3 cDNA and 68 ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCCG CCGCCTCCAC CCTCGCCTCC CTCTCCGCCA CCGCGGCCGC GGCCGCCGGC AAGCGCCTCC TCCTCTCCTC CCCCTCCCGC TCCCTCTCCC TCTCCCTCGC CTCCCGCGGC  CGCATCGCCG TCATGCCCCA CCTCCGCGCT GGCATCCTCT CCGCCGCACC GAGGAGGGCG GTGTCGGCCT CGGCCCCGGC CGCGGCCACC ATCGCGGTCG GGGACAAGCT CCCCGACGCG  ACGCTCTCCT ACTTCGACTC GCCCGACGGG GAGCTGAAGA CGGTGACCGT GCGCGACCTC ACCGCCGGGA AGAAGGTGGT CCTCTTCGCG GTCCCCGGCG CGTTCACCCC GACCTGCACG  CAGAAGCACG TCCCGGGGTT CGTCGCCAAG GCCGGGGAGC TCCGCGCCAA GGGGGTCGAC GCCGTGGCCT GCGTCTCCGT CAACGACGCG TTCGTGATGC GGGCGTGGAA GGAGAGCCTC  GGCGTCGGCG ACGAGGTGCT CCTCCTCTCC GACGGCAACG GCGAGCTCGC CCGCGCCATG GGCGTCGAGC TCGACCTCTC CGACAAGCCC GCCGGCCTCG GCGTGCGGTC CCGCCGCTAC 
GCGCTCCTGG CGGAGGACGG CGTCGTCAAG GTGCTCAACC TCGAGGAGGG CGGCGCCTTC ACCACCAGCA GCGCCGAGGA GATGCTCAAG GCGCTCTGA 

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CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCCG CCGCCTCCAC CCTCGCCTCC CTCTCCGCCA CCGCGGCCGC GGCCGCCGGC AAGCGCCTCC TCCTCTCCTC CCCCTCCCGC TCCCTCTCCC TCTCCCTCGC CTCCCGCGGC  CGCATCGCCG TCATGCCCCA CCTCCGCGCT GGCATCCTCT CCGCCGCACC GAGGAGGGCG GTGTCGGCCT CGGCCCCGGC CGCGGCCACC ATCGCGGTCG GGGACAAGCT CCCCGACGCG  ACGCTCTCCT ACTTCGACTC GCCCGACGGG GAGCTGAAGA CGGTGACCGT GCGCGACCTC ACCGCCGGGA AGAAGGTGGT CCTCTTCGCG GTCCCCGGCG CGTTCACCCC GACCTGCACG  CAGAAGCACG TCCCGGGGTT CGTCGCCAAG GCCGGGGAGC TCCGCGCCAA GGGGGTCGAC GCCGTGGCCT GCGTCTCCGT CAACGACGCG TTCGTGATGC GGGCGTGGAA GGAGAGCCTC  GGCGTCGGCG ACGAGGTGCT CCTCCTCTCC GACGGCAACG GCGAGCTCGC CCGCGCCATG GGCGTCGAGC TCGACCTCTC CGACAAGCCC GCCGGCCTCG GCGTGCGGTC CCGCCGCTAC 
GCGCTCCTGG CGGAGGACGG CGTCGTCAAG GTGCTCAACC TCGAGGAGGG CGGCGCCTTC ACCACCAGCA GCGCCGAGGA GATGCTCAAG GCGCTCTGA 

Retrieve as FASTA