Entry information : OsPrxII0502 (OsPrxIIE02)
Entry ID 4019
Creation 2006-10-30 (Nicolas Rouhier)
Last sequence changes 2006-10-30 (Nicolas Rouhier)
Sequence status complete
Reviewer reviewer name not stored
Last annotation changes 2010-08-03 (Marie Brette (Scipio))
Peroxidase information: OsPrxII0502 (OsPrxIIE02)
Name (synonym) OsPrxII0502 (OsPrxIIE02)
Class Atypical 2-Cysteine peroxiredoxin (type II)    [Orthogroup: PrxII001]
Taxonomy Viridiplantae (green plants); Streptophyta; Angiospermae; Monocotyledons
Organism Oryza sativa ssp japonica cv Nipponbare    [TaxId: 39947 ]
Cellular localisation Chloroplastic
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value OsPrxII0502
start..stop
S start..stop
ScPrxII05 337 2e-119 19..225 4..211
SbPrxII02 308 7e-108 20..225 21..230
SpPrxII0502 308 8e-108 59..225 63..228
ZmPrxII0503 297 4e-103 3..223 2..229
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 5167260..5167937 678  
complement(join(5167260..5167937))


exon

Literature and cross-references OsPrxII0502 (OsPrxIIE02)
Literature Gama et physiologia plantarum in press;
Dietz et al The function of peroxiredoxins in plant organelle redox metabolism.
J Exp Bot. 2006;57(8):1697-709.
DNA sequence http://www.ncbi.nlm.nih.gov/entrez/viewer.fcgi?val=46389821&itemID=80&view=gbwithparts
Protein ref. UniProtKB:   Q7F8S5
DNA ref. GenBank:   NC_008395.1 (5167937..5167263)
Cluster/Prediction ref. UniGene:   Os.4251
Protein sequence: OsPrxII0502 (OsPrxIIE02)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   225
PWM (Da):   %s   23051.98  
PI (pH):   %s   6.53
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MAAPTAAALS TLSTASVTSG KRFITSSFSL SFSSRPLATG VRAAGARAAR RSAASASTVV ATIAVGDKLP DATLSYFDPA DGELKTVTVA ELTAGRKAVL FAVPGAFTPT CSQKHLPGFI 
EKAGELHAKG VDAIACVSVN DAFVMRAWKE SLGLGDADVL LLSDGNLELT RALGVEMDLS DKPMGLGVRS RRYALLADDG VVKVLNLEEG GAFTTSSAEE MLKAL 

Retrieve as FASTA  
Remarks Complete sequence from genomic, cDNA, 62 ESTs.
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCTC CCACCGCAGC AGCTCTCTCC ACCCTCTCCA CCGCCAGCGT CACCTCCGGC AAGCGCTTCA TCACCTCCTC CTTCTCCCTC TCCTTCTCCT CCCGCCCCCT CGCAACAGGC  GTCCGCGCCG CGGGGGCGAG AGCGGCGCGG AGGTCGGCGG CGTCGGCGTC CACCGTGGTG GCGACCATCG CCGTCGGAGA CAAGCTCCCC GACGCGACGC TGTCCTACTT CGACCCGGCG  GACGGCGAGC TGAAGACGGT GACGGTGGCG GAGCTGACGG CGGGCAGGAA GGCGGTGCTG TTCGCGGTGC CCGGCGCGTT CACGCCGACG TGCTCGCAGA AGCACCTCCC GGGGTTCATC  GAGAAGGCCG GGGAGCTCCA CGCCAAGGGG GTGGACGCCA TTGCCTGCGT GTCGGTGAAC GACGCGTTCG TGATGCGCGC GTGGAAGGAG AGCCTGGGCC TCGGCGACGC CGACGTGCTC  CTCCTCTCCG ACGGCAACCT GGAGCTCACG CGCGCGCTCG GCGTCGAGAT GGACCTCTCC GACAAGCCCA TGGGGCTCGG CGTCAGGTCG CGCCGCTACG CGCTCCTCGC CGACGACGGC 
GTCGTCAAGG TGCTCAACCT CGAGGAGGGC GGCGCCTTCA CCACCAGCAG CGCCGAGGAG ATGCTCAAGG CGCTCTGA 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGGCCGCTC CCACCGCAGC AGCTCTCTCC ACCCTCTCCA CCGCCAGCGT CACCTCCGGC AAGCGCTTCA TCACCTCCTC CTTCTCCCTC TCCTTCTCCT CCCGCCCCCT CGCAACAGGC  GTCCGCGCCG CGGGGGCGAG AGCGGCGCGG AGGTCGGCGG CGTCGGCGTC CACCGTGGTG GCGACCATCG CCGTCGGAGA CAAGCTCCCC GACGCGACGC TGTCCTACTT CGACCCGGCG  GACGGCGAGC TGAAGACGGT GACGGTGGCG GAGCTGACGG CGGGCAGGAA GGCGGTGCTG TTCGCGGTGC CCGGCGCGTT CACGCCGACG TGCTCGCAGA AGCACCTCCC GGGGTTCATC  GAGAAGGCCG GGGAGCTCCA CGCCAAGGGG GTGGACGCCA TTGCCTGCGT GTCGGTGAAC GACGCGTTCG TGATGCGCGC GTGGAAGGAG AGCCTGGGCC TCGGCGACGC CGACGTGCTC  CTCCTCTCCG ACGGCAACCT GGAGCTCACG CGCGCGCTCG GCGTCGAGAT GGACCTCTCC GACAAGCCCA TGGGGCTCGG CGTCAGGTCG CGCCGCTACG CGCTCCTCGC CGACGACGGC 
GTCGTCAAGG TGCTCAACCT CGAGGAGGGC GGCGCCTTCA CCACCAGCAG CGCCGAGGAG ATGCTCAAGG CGCTCTGA 

Retrieve as FASTA