Entry information : MauLPO
Entry ID 4045
Creation 2006-11-03 (Christophe Dunand)
Last sequence changes 2016-01-19 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-19 (Christophe Dunand)
Peroxidase information: MauLPO
Name MauLPO
Class Lactoperoxidase    [Orthogroup: LPO001]
Taxonomy Eukaryota Metazoa Chordata Mammalia Cricetidae Mesocricetus
Organism Mesocricetus auratus (Golden hamster)    [TaxId: 10036 ]
Cellular localisation Secreted
Tissue type Lacrimal gland
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value MauLPO
start..stop
S start..stop
MmLPO 1274 0 1..710 1..710
RnoLPO 1217 0 1..710 1..709
PpyLPO 1212 0 1..709 1..711
HsLPO 1211 0 1..709 1..711
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 1..76 76 N° 2 1088..1169 82 N° 3 3821..3981 161 N° 4 4488..4605 118
N° 5 4905..5034 130 N° 6 5685..5891 207 N° 7 7086..7410 325 N° 8 7878..8038 161
N° 9 11097..11349 253 N° 10 12152..12325 174 N° 11 13444..13681 238 N° 12 13874..14081 208
join(1..76,1088..1169,3821..3981,4488..4605,4905..5034,5685..5891,7086..7410,787 8..8038,11097..11349,12152..12325,13444..13681,13874..14081)


exon

Literature and cross-references MauLPO
Literature Lowe,T.M. and Eddy,S.R. tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence. Nucleic Acids Res. 25 (5), 955-964 (1997)
Protein ref. GenBank:   AAM15535.1 UniProtKB:   Q8R481
DNA ref. GenBank:   NW_004801661.1 (1..14081)
mRNA ref. GenBank:   AF498045.1
Protein sequence: MauLPO
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   710 (688)
PWM (Da):   %s   80039.95 (77705.6)  
PI (pH):   %s   8.37 (8.17) Peptide Signal:   %s   cut: 23 range:23-710
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MKVLLRLPALLASLTLLQMAASTRNATRTATIRETVDEVKVQVNKAFLDSRDRLKTDMSNLAPTVRHLSGYLKQAKGRTRTAIRVGQVWEQSLKRLRRMVPLTNVGQGLDLTSLSWEVGCGHPAPTVTCNISNPYRTITGDCNNRKNPELGSANRALARWLPAEYEDGLSLPFGWTPGKTRNGFPLPPRDVSNQVLDYLNEEEILDQNRSLLFMQWGQIVDHDLDFAPETEMGSDNYSKAQCDELCIQGDNCFPIMFPKGDPKLKTQGKCLPFFRAGFVCPTSPYQSLAREQINALTSFMDASMVYGSEPSLANRLRNLSSPLGLMAVNEEVSDHGRPLLPFVNVKPSPCEVINRTAGVPCFLAGDSRASEQILLATSHTLFLREHNRLARELSRLNPQWDGEKLYQEARRIMGALIIITFRDYLPILLGDELQKWIPPYQGYKETVDPRISNVFTFAFRFGHLEVPSTVSRLDENYQPWGSEPELPLHKLFFNTWRVVKDGGIDPLVRGLLAKKAKLAHQDKMMTGELRNMLFQPNHTVHGFDLAAINIQRCRDHGQPGYNSWRAFCGLSQPKTLEELSAVLRNEVLAKKLMDLYGTPDNIDIWLGAIAEPLVRRGRVGPLLTCLLGQQFQRIRDGDRFWWENPGVFTEKQRDSLQKMSFSRLVCDNTGINKVPLNPFQPNSYPHSFVDCSAIEKLDLTPWASVKK

Retrieve as FASTA  
Remarks Complete sequence from whole genome shotgun.
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAGTCCTTCTGCGCCTCCCAGCCCTCCTGGCTTCCCTGACCTTGCTCCAGATGGCAGCATCTACCAGAAACGGTAAGTGCCATACTGTATTCACTTCTTGGAATAAGGCTGGGACA
AAAGCACTAGAAGCTGTGTGGCTGGGGACAATATAGGTTTAGTCACACACCCAGAAGGCTAGAGATCCAAGGTGAAGGTAATGGAAGCGCCATGTTCCTCCCGAAGGCTCTAAGGGGCTC
CCTTGTCTGTTCCAGCTTCTGATGGCTCCAGACATCTTCAGTTTCCTTGGCTTGTAACCCTGTCTCTATGTGTCCTCTCTGTGTATCTTTTCCCACCATTCACTGAACTTTGGGTTCACG
ATCATTAGCATGACCTCATCTGAATTAATCATATCTGTAGAGACTATTTGGAAATAAGGTCACACGCTGAACCTTCCAACCAGACACAGTTTAACCCACGGTACTCTCCTTGAAGGGAAT
AGATGCTGCCTCTTGTACTCCATACCCCAACCTGAGGCGATCAAGGAGCACATCTTTCCTTTAGTATCCTCACGTTCCTTGCTCCAGCGTCCTGGCTATTGGGTAAATTCTGAGAGGCTT
GCTTAAGGACCCACAAGACCATCTCACCAGAAACCAGGAAGCCCAAGCTGAGTGGTCACACTGGACATCCTCTTCCTGGGCACTCCCAGGAATTTTGACATCTTGCTGAAGAGCAGACTG
GACTCTTCCCACTCTGTGTCTCCTTCTTTTAAGGATATTGTTCTCAATCTGCAAGTCAAGACCCCTTTGAGGGGTTGAATGACCCTTTCCCAAGTGTCACCTAAGACCATGGGAAATATC
AGATATTGACATTATGATTCATAAACAATATCAAAATTACAGTCATGAAGTAGCACTGAAAATAATTTTATGGCTGGGAAGTCATTAGGGAGGTTGATAACCACTGTTTTAGGGAGCCTT
GGAAAGTGTCCTTAGTTCCCTACCTGCACTGGTTTGAGATATAAGATGATGGCTGAGAGGAAAGCAGAAGTAAGGGGAACTCAGGAGTGATACGTGATATCCTGCTTCCTACTTTTGCCT
CCCCAAGCTACAAGAACTGCCACCATCCGTGAAACAGTGGATGAGGTCAAGGTCCAGGTCAACAAGGCCTTCCTGGATTCCCGGGACAGGTAAGTGAGACATGCAGACATGTGTGTGAAC
TCCCTTTCCAGGCGACTGACAAGTGCACCTAGACCAGCCCCAACAAGCCAGGGAGCCAAAGGAATTATAAAACTTGCCCTTCCACCTCCACCCCCACCACGTAGGTAGCAAATAGGAACA
ACAGCTTCCAAGTCCCCAAATCCCAGCTTCTAATGGTCTTGAGAGGACACCCAGTGAAACTCCAAAAGGACTTCCCTCCTTGTGGCCCCGGGTTTCCTTTGATTATGCCTGCCAGACTCA
GGAAGTTTTTAATTTAACTAATGTACTTGGGTCAGGCGCTCCAGAAACAGAACCACAAGCACGGAGTCCGTGCAGGTAGTTTACCAGAGATGTGTCCTTGAGGAAGTTGCCACATAATAC
AAATTTAAATGAGGACACAGTTTGCAGTGTGGCCTCAACCTGGCCAACCCGCCACCACCCAGAGAGACCTAGAGTGTATGGTGTACTGTGGAGTCTGCCCCACCTTGGAGCAAGAGGGTA
TAGCTTTCACATACCCACATAAGGCTGATGTGGCCCAGACTTGGGGCTCCAATGGCAAGAGTTAAGTATGCTGGTGCTGTTACTGGGAACCGCTAACCAGGCAGCCACAAGGGCTCAGGA
GCAAGTGTCTAATGAGGCTGCAGCAGTGATCCTTTGGGGGCTGCACCCACAGCAGCTGGACAAACCCTCCTGATGGATCTGAGGCACCTGAGCAGCAGATCAAACCACCATCTACCCTGT
GAAGGGGCTGGAGCTCATGAAACCAGCAATTCGGACCAGTTCCTTCCCTCAGGAAGTCTACCTTCCACCAGTAAGGGGCAAAGAGAGCTGCGGATGTAGCTCAGTGCCACAGTGACAGAG
TCCTAGCCAAGCAAGTGCAAAGCTGTGGGTTCAATCCCCAGTCGGGGTGGGGGGAGGGAGGATGGCCATAGCAGTGCGTAGAAGACGTCTTCAATCCTTCATAGTTCTGTCTCTCAGCCT
CATCGCTGGGTGAGCTCTCTAGTCCATGATTTTTGTGGGTGACTTTTAGATTGCTTTTAGTCCCCAGGAACTGTGTCATTTCACAAGTTCAAAGGTCAGCCTAAGGAGTTGGCTTCCTTG
ACTCTGAAGTGCTTGGGCTCTGCGGTGACAAGAGGGAGCCCAGAGGTCCTCTCCCTTGTTCAGGACTCCCCCCACCCACTGTCCTTGGGGGCTGAGTGGAGAGAGGAGCAGGGAAGCCAG
GGATGACAAATCCACTAGTCCTGAACATCTCAGTGGCTTAGTAGGGCCTCTCTTTGGGTACTTTTCTGAGTGTGTAAAGAAATCTGTTATCAACTCAAAGACCTGGAAAGTTCTCTGGCC
TGCACTGAGAGCTCCGAACCTGTGCTTGGGGCATCTGGCTTTAGACCTGACCCCACCCCCTCTGGGCTACAGAGCTACACTGTCTCATAAAAACAGAAAAAGGATGTGCATGGTATTGTG
TGACTTTAATCCAGGCACCCAAGAGGCAGAGGCAGGCAGACCTCTGTAAGTTTGAGGCCAGCCTGGTCTACATATTGAATTCCAGGCTAGCCAGAGCTGTTGCATGATAAAATCTTGCGG
GTTTTTTGTTTGTTTTGGATTGGTTTGGGGGGGTTAGTTTGTTTTGGGGGTTGTTTGTGTTTTGTTTTGTTTTTTCAAGACAGGGTTTTTCTGTATAACAGCCCTGGCTGTCCTGGGACT
TGCTTTGTAGAGCAGGCTGAGTTCTGGGGTTAAAGGTGTTGCCACCTTTAAAGGCAGCGTGGCTCTTTGTAGGGAGGTTAGGCTAGGGCTGGCCCTCCTTTGCCTTTCTTCTCATCTCAT
TCGGCCCTTGGGATAAGCCATGACACCCACAGCACTTTAAACGAAGCTAATGGCCTAATATGAAGAGACAAGACAGGCATTGTAGCCAGTGAGTTAAACATAACCAGAAGACTGGTTTTG
TGAAAACCTGAGCCATTTTCAATATTTCAGAGCCTTAGAGACAAGGGCCTCATAGAGAGATCTCACACACTAGGAAACTGAGGAACAGTGAGGCAGGAGGATCTTTAAGTCCCTAGCCTC
TCTGAATTGCCATAGACTTCACAGTGGAAGGCCTTGAGGACTCTTGTTTTGCACGTGGAAGATAAAGCGCTAAGACTGAGCTTCCCTGAGACGGTTGACATGAGGTTGGGTGCTTCTGGG
CACAGACTCTACACTAGCTCTAGGGTCAGATGCTTGAGCAGAAATGGAGGCCCATTCATGTCCCGGTCCTAAAATTCTTAGGTTATGAGGCTCAGCAGTGTAGCAGGAGTTCTCAAGTCT
AGATTCATCTGTTGCAGGACTTGGGTGGTCTTAAGATAACCAGTTAGTTCTGACACAGCCATCCAGGTACAATCTTTTGATTTTGGGGCTCTTTTGATCCATCCACCGGCTTTACGTAAG
GTCAGACTTAGCTATGCTTCATAGCCACAGTGGTTTCCTTCTCCCCAAAGAGGTTTTTCCAGCAGCACCAGACGAGACAAGGGGGAGATGCTGAGAGCCCATGTTTCCTTCTCAGAAACC
CTGTGTCTCCCCCGTTCACACACTCCCTTGCCCCTCTCCTGTGAGCTACCGACAAACTTCCGCAGAGTCAACTCATGAGCCCCACTGGTTCCTGCCGCAGGCTGAAGACTGACATGAGCA
ACCTGGCTCCTACCGTCCGTCACCTCTCAGGGTACCTCAAGCAAGCCAAAGGCCGGACACGCACAGCCATCCGCGTCGGGCAGGTGTGGGAGCAGTCTCTAAAAAGACTGAGGAGGATGG
TGCCCTTGACCAATGTCACAG
GTACAGACAGTTCACTAGCCCTCTAATGACAGGGAGGGACCATGAGTACAGACAGAGCCCACCAAAAGCTGCTAGGGACTATCTCCACCAAGAGGCGTG
TCTGTCTTCCTTCTTAGTTAAACCCAAAGGCCACACTGGCAGAGCTCAGAGGGCCTTCAGGGACAGCTAAGCCAATGTCCCTTTTGCAGATGAAAGAACTCGTGACAAGGTTATAATGTC
AACTGATAGAGAAGGAACATTTGTGCTCAGTGTGTTGTGACAGTTTGTAAGTGACTGCCTGGAGGAAATGCCAAAGTCAATAAACAGGGTTTCTGGCCCCAGACCAGGGTCCTCACTACT
GCAGATGGAGAGGAGCTGTAAGCCACCAGTGTCATATGAGATTGCTCTCACGAGGTGAAACTTCTAGCCTGTTCTGGGGAACACTGAACTGTCACCTCTAGTCTGACCCCCTGCCTGTTG
GCAGTGTCTCAGAACTCCGCCCTGTTTGGGTTTCTCTTCTGTTTCAGGCCAAGGCCTGGACTTGACTTCGCTCTCTTGGGAAGTGGGCTGTGGTCACCCGGCTCCGACAGTGACTTGCAA
CATAAGCAACCCTTACCGGACCATCACTGGAGACTGTAACAACAG
GTGACCCTACCAGCCACCACTCCAGCAAGCATCTCTGCCCCTTGGGCTTTGCAGGCACAACTACTGGATCCCTTT
AAAGATCCCTCATCTCCAGTGAGGTCACTGTGACCCACTGGGAGCGGCCCTTTCCATCGAGCAGACAGTCCCATGTCCTGGGCTTGGGAAAATGCAGACCCCCACAGGGCCCCTCCTCCG
CATCCTCTTTCCCTCCTGCAGAGCTCAGGTTAAGGGTACCAGGGTGAAGGCAGGGTACCATGAGGTCACCTGCCAAAGCTCAGAGCTGTCTTGCTGGGTTTCAGGAAGAATCCAGAGCTG
GGATCCGCCAACAGGGCGCTGGCTCGATGGCTGCCCGCAGAGTATGAAGACGGGCTCTCCCTCCCCTTCGGGTGGACGCCAGGGAAGACGCGGAACGGCTTCCCTCTACCGCAG
GTGAAG
AAGGGCGGGGCACAGGATGGGAGGCAAGGAACCACACACAAGACACAGCACCCAAAAAGGAAAAGGGGAGGCGCAACTCAAATTAGGACTTGCACCCTAGCGATATGTTCCCCGAACCGC
CACGAGAGGGCGGCAGAGCCCGGGGCCCAGCCAGGTGGTGGCGGTAATGTCCCAACTGTCACAGGCCTGATACCCTGGGGTCTCCCAGGCAGATGGTTTCCTCTCTCTATTCTACTTGCG
CCTATCCTGCCCCAGCCCCTGGAGTGCACCAGCTGTCGTTTTACTGCAGGTCTGATCTGTTGCCCTCATCTGAGCTGGCAGTCCCTCCCCAGGGTCCTTCTTCCCATGCCCAGAAACCTG
GCACGTCTGTCACAGGCATGTCAGCATCAGCCTGCCTTGGCTTTCTCTCTCCATAGTAAGGACGTTTGACCATTGTCCAGTCACACAGACGTAGGTTCAATCCCATCCTACCCCTTTGTA
GCTGCATTGACTCCCCTCTCTAAGGCCGGGTCCTCATCTACAAAGTTACCATTCACCCCTCCTCGTTGGGGATTGCATTGTAGATTCCCTAACAATCTGTGGTAGGATCTGACGCCGCAA
AGCATGCTTTCCTCCAGCCTGACTCCCCTCCTCTCTACCTGCAGCCCCGTGACGTCTCTAACCAGGTCCTTGACTATCTGAATGAGGAGGAAATTCTGGACCAAAACAGATCTCTGCTCT
TCATGCAGTGGGGTCAGATCGTGGACCACGATCTGGACTTTGCCCCTGAAACTGAGATGGGGAGCGACAACTACTCCAAAGCCCAGTGCGATGAACTCTGCATCCAGGGAGACAACTGCT
TTCCCATCATG
GTAGGCCTCTGCCTCCAGGTAGATGTCCCTGACGCCCCGTGCAGCTTCCAGTGTAGCACACACTTCCAGCCCAAAGATCAGGACCTCTTGATCCTGACGTCACAGCTCC
CCATCCACTCATAGGCTCATCCATCCACTCAGTAATCAGACAATAAGAACCTACTCTGCGCCAGGGAAAGGCGCAAGCACCAGGGATTCAACGGCAAGATACTGTGTTTGCGCTCAAGAG
CAGCAGGCTGGCATAGAAACGAGCACGCGAACTATTGACAGGATTAGGAAGTCTGAGCTCGTCTATATCACCCAGCAGCATCTAAGTCTCCGGGGGGATTTATTAGAAACCCAAAATCTC
AAGGCCCCACCCATGTTGGGAGATAGAATCTGACTTTTATCAAGACATATCCATCTGTCCCACCCACCCACCACCTTTCAGCCATGGGATTCATCCTATGCTTGGTTTATGGAAGTCTGC
TGCATGTTGCCCTTTCCCCGAAGGAGCTGGAAGCAGATTAGTGACTCAGTGAGCAGCAAGGATATGGAATGCCCAGCAGGAGAGGGATTTGCAATAGTCTCCTCGTCTTAACCATAGAGT
TTGCATTTACAGAGTTATTTGTTTACTCGACAACAAATCAAGACTGGGTTGTGGTGAAAAAAAAAAACACAAACAAACAAGCAAAACAAAAAAAAGAAAAAAACTGCACCATGAACTGAG
GCTGATCCAGACTTGAGTCTCACATTTTTCCCTCCTAGTTTGTGGGTGCTGAGGCAAGTTAATTTATTGACACTGTTTCTCATGTGTAAGAGACTCACAGGCTCTCTGGGGGACAGAATG
AGGTGAAGTATGCATCCAGGCTGGCACGTGGAATTCCATGGTTGCTATTTCAGGACTAATTACTAAGGCTCATGTCATACATTGCTTGCCTGTCTGGGGCTCTCAGGAAATCCTGCCATT
TCAGAGCTCTTGCTGTGAAAGAATGAATCATTATTTTCTGTTCTTGCACATCAGGGTATAATGAACTTTGGAGTGTTATGGGCCCAGGAAGTATAATGTCAGAAGGAGGCATCTAGGGCC
AGTGTCTGGCAAAAGTCCCACAAGAGTGCGTGAACATCTTTTCTACCAGACTGACCCTGGGGAGGGTGACCAGGGGACAGATGTTTGGTCCTCATGCAGTCATTTCCCAAACCATCTCTC
TACAGTTTCCCAAGGGTGACCCTAAATTGAAGACTCAGGGGAAATGCCTGCCTTTCTTCAGAGCTGGATTTGTCTGCCCTACATCACCTTACCAATCCCTGGCCCGAGAACAAATCAATG
CTCTAACTTCTTTCATGGATGCTAGCATGGTGTATGGTTCTGAGCCAAGCCTGGCAAATCGACTTCGAAACCTCAGCAGCCCCCTGGGTCTCATGGCTGTCAATGAAGAGGTCTCAGATC
ACGGACGGCCCCTCCTGCCTTTTGTCAATGTGAAGCCCAGCCCCTGTGAGGTCATCAACAGAACGGCTGGCGTTCCCTGCTTCCTGGCAG
GTAAGTCGAGTCTGGGGAAAAAGAAAGGGG
CTAAGGGACAAAGGGATCATCCAAGGAAGCTTCTCCGTCCCAGCACCTTTCCAGGACAATGCCCCAAGCCTCCACTATCTGCAGCACTGAACAAGGAGTAGAGAAAGGGCCCAGATAAGT
GTTCACTGCAGAACAAAATAAGTCCAGAAAAAGACACAAAGAAAACCCACATATCCCCGTCATCCACCAAAGTTAGTCATTAGTATTTTCATATAAATCTTCCTTGTGTTCCTTGGGTAT
AGTTCTAGCCCAGCTTGGTGGTACAGTTCCATAATCCCACCATGTCCCTCGTCTGTCGCTCTCCACCTGATTTCCTTTAGACTTCCTTGAAGGAGGGGCTTTGGAGAGAGTCCTGGGGGC
TCCATCTTTCTGTGTGCAGGTTCCTGTTCCTGGTCCCGCTTAGAAAGAACCCATCTTCCTGCCTTTTGGACTTTTAGGAGACTCCCGCGCCTCGGAGCAGATTTTGCTGGCCACATCCCA
TACGCTGTTTCTCCGGGAGCACAACCGACTGGCCAGAGAGCTGAGCAGACTCAACCCCCAGTGGGATGGTGAGAAGCTCTATCAGGAAGCCAGGAGAATCATGGGAGCCCTCATACAG
GT
ACGGAGAAGGAGCACCTGCCACTCGGAGCCGCCTGCGCCAGCTCCCACCTCTGCTGTCTGTGCAGCAGCTCCAGCTGCCTGCTGTTCCCACACTCTTCCTCACTCCTTCCTCTCCTGCGC
CCCTCTCCAAGCACCTGATCAGCTCCCTGCTTTAAAACATACCCCACGTTCCGGATGTGGGGAGTCATCCATGTGTGGTCCTCCATGAGCCTGCCCCGTTCCCATCACTGCACCCACAGG
TTCTCTCACGATTGAGGCTCTTCCCTTGCAATGACTTCAGCTATTTTCATTTCTCTTCTTCTTGAATTCTCTCTCTGTAAGCTACATGCCATAGACATTCTTGAGTTTGGATTGCTTTAT
CAACTAACTGAAAGAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTGGGTTGGTTGGATTTTAAGATAGGGTCTCATTTAGCCCACACT
GACTGTGACCTTCCGATACTCCAGCCTCTTCCTTCTGAGCTCTGAGCTCATGAGTGTTCAACATCGTATCTGGGCGCTAAGTAGATACGATCCCCAGGGTCTGCTGGAGGTTCTGTATTA
GCCTATTTTCTCCTGTTGTGTGGGTGACTAACTTCAGCTCATCTTTCCCATGTCTAGCCTCTGTTATTTCCACTCCACTGCTGAGTGGACTCAAGCTTATTATTCCTGTATTATTACTAT
TATTTCAAGTAGTGCATTTTCAATTCCATAATTTTGTTACTTTTTTACTTTTAAAACTTCTTTGCTGAGATGATTCCCTTTCCCACCGGTTTCAGGAAAACCTGTATTCTGATGAGGCAT
CTTTAAGATGGTGACTTTAAAATCGTTATCAGCTGTAGGCAGGGCTGCATCTCAGTGGCAGAGTGCAGGCCTAGACAGTCAAGGCTCTGGGTTCAATCTGAAACACTGCAGCAAATAAAT
TACACACTATGTGTTTGTCCGCGTGCTTGGGGTATGCATATGTGTCTGGGGGTTTGCATGTACATATGTGTATGTGGAGGTCAGAGGTCAGACTCCCTCATGTGTCATTCCTTCAGAAAA
CTAAGCACATACTTTAGCTTGGAACTTACACAGTAGGCTAGGCTGGCCGGCCCACAAGCTGCAGGGATCTACCTGCCTCTGCCTCCCCAGCTCTGTGTTCTGGGGAGCAAAGCAGGTCTT
TGTGCTTGCAAAGCAAAGCGTTCTGCTGACTGGGCCATCTCCCCAGGGCTGCATAAACTCCTTATGAACTAACTCATCTGACTCCTGTCACTATTGGCATCAGTTGATGCATTTTCTCAC
TCAAACTGCGGTTTTCCTGGCTCGAAGTATTACTGAACATTCCAGTGACTTTAATACTATCTGAATCTTTGCTCTAGCTTGTCTTTACCCTGCTGAGGTCTAGCACACAGGTTCTAGTCT
GCTTTTGTTTCCGTTCCAGTGACAGCTTGGTTCCAGGTCCTTCCAGTGCCCAATGGTCCTCTTCATTCTTCCAGTGCATATGAACTTCCCATTCCATTCCTGCTGGTGCTGATTCAGGGC
TCCAAAGTTGGTTTTTTCTGGCTCTCTGTTGTTGCTAAGCAACCTCCTATAGAAGCAGAAGCCACCATGCCTGGGTCTCCTTGGTGAGGAGCCAAGGGTGAGAGGAATCAGTGTTCCACT
GCCCCCCAGAAGGCTGAGATGGTCTGTCACCTGGACTGAGGAGCAGGGAAGCTTGGCTGGGCTCTGGAGGGCTTGTGTGTGAGGTAGGGGTTGGGGCTCTCTGCTAGTCTGCACAGGGTT
TCCCTGGCCCTTAGTCTCTGAAAAGAGCAGACATAACTTGGCTTCTTTCTGCATGTCTCTGTTAAGCTTCTGCAACCAGTCCTGTCTGGGGATAGAACTCACCACATGGTCATTCCTCAA
ATTCTGGGTTCCCCAGATAGTTCATATTCTTTTTCTAGCTTTCAGAGTATCTTCTTGAAGTTTTAACTTATGTGTATCTTTATGTAGTCCACAGGGGGTGTGAGGTCCCCTGGAGTTACA
GATGGCTATGAACCTTCTGATGTGGGTGTTGGAACTGGACTCAGGTCCTCCAGGAGAGCAGCAAGTGCTCTTAAGCACGGAGCCTCTCTCCGGTCTCACTAGTCTCCTGTTGCACAGGCT
GACCTCAGACTCCCTGTGTAGACAAAGCTGACCTCCAACTCCCAATCCTCATGCCTCACACCGCCAGCCCTGGGATTAGAGGTGTGTATCACCACAGCCATGTGGTATTGTTGCTGTCGT
TTTAGAGTTGTTTCTTTGAGTTGGAAATAGCAGTCTCACTCTGTAGACCAGGCTGGCCTCAAACTCACAGAGATCTGCCTGCCTCTGCCTCCCGAGTGCTGACGTTAAAGGTGTGTGCTA
CCAACACCTGGCTGGCTAGGACTTCTTATTGGCTAGCTCTGTCTTACTTATTAACCCATTTCTATAAATATATATATATATATTTCCACGTGGTCTTGGCTTCCCAGAGAATGCCTGAAC
CTGTTACTTTGGTGGCTACATGGTGTCTCTCCGAGGTCTATCTCTGCCTACCTTTCCCAGAATTCTCCTCGTCTCTTGATCCCACCTATCTTCCTGTCTCTATTGGCCAAACAGTGTTTC
ATTCATCAACCAATAAGAGAAACATATATCCAGAAGGGCATCCCCATCAGAGCGGGGAGGAAAATAAGGCTATACCACCCTGTTCTAAAACAAAAAGGCACTCATCTTATTTTTAATTAT
AAGGGTGATCTATTTCCATATAAAATATTAGAGCCAGAAATCCTGTTGCTAAAGCACAGAGCATTAAATTGAAATGACCAGTTAGTATAACCAATGTGAAGACAATCATGAGAAATAGAT
GAAAGGATGCCAGGATTGATTAGCAATGTCTGCCATGGTCATAGGAATGGAAACTGGTTACAAACGCTATCCATTTGCCACTCTCTTGGCAGCTGTTCCTCTATAGCCTCCCATTGCAGA
GAGGAGAGGTTTCCACCTTCTCATGTCCTTTCCTCACGACTTGTGTCTCCCTTCAGATCATCACCTTTAGGGACTATCTCCCCATCCTACTGGGTGATGAGCTACAGAAGTGGATACCCC
CGTACCAAGGCTACAAAGAAACTGTAGACCCGAGAATTTCCAATGTCTTCACCTTTGCTTTCCGCTTTGGCCACCTGGAGGTCCCCTCGACTGTGTCCCGCCTGGATGAGAATTATCAGC
CATGGGGTTCAGAACCTGAGCTCCCCCTGCACAAGCTCTTCTTCAACACCTGGAGGGTGGTCAAAGATG
GTGAGTCTTCTCAGGGAGGTGCCCTTGCCTGGGTCCTCTCATTCCACAACC
AGCTTATAGGGACCCCTGGCATGAGAGTCACCTTCCAGACACTTCCTGTGTGACCTTGGACAAGGGAATTCGTCTCACCGAGCCTTAATTTCCTTGTTTGTAAAACGAGGGCAACAACAG
AGCCTATGTCATTGGATAGCAAATGAAATGAGATAGGTGTGTAGCACACCCTATTGTAATTCCCAACACACAGGAGTGTTTAGTAAGTAATAGCCATTACATACAGCTGGCTTCCTACTT
GGGTAAGACTCTTCTGTCTTTTCCTACCTTAGGCGTTGCTGCACTCTGAAAACAGAATTTGTGAGCTTGGCGAATTGTTCTGTTCTACCTCCATGAGGTGCTATAGGCTGGGTGCAGCTT
TCTTATCCCTCAGTCAAAACTGACCTTCCTTCAAGCTTAACCAGTCGGGGCTGTTCCCTGAAGATATATGGTCCTCTTCCTCTAGGGCAATGTGTGGGAAATGAAGGAGCTGACTCCATG
AACTAAAACATTAAAAAAAAAACTCTTGCTATTCATTCACCCTTCAGGCCGTGAGTGACCTTTTCTGTCACCTCAGAAACTGTAGCCTGGACTCCTCCTGCCCTGGGACAAAGGGAAGGC
TGCATTGTGCTCTTCTCTTCCCACCTCCAGCCAGAACTACCTGGTCATTCCCGTTTCCTATTGAGAGAAGGTATCAGGGCAGAGAGGGCCCAGCACGGAAGATGCCCTCCCCTATTCCTA
TCTAAGAATGGCCTTTGGTGTCCCTCTGCAGGTGGAATTGATCCTCTGGTTCGAGGCCTGCTGGCCAAGAAGGCCAAACTGGCGCATCAGGATAAAATGATGACGGGGGAACTCCGCAAC
ATGCTGTTCCAGCCGAATCACACCGTTCACGGCTTCGACCTAGCTGCCATCAACATACAGCGCTGCCGAGACCACGGACAGCCTG
GTGAGTGGGTCTAAGGGCTCAGTTGGTCTGGAGAA
CTTTTTGGCTACCTTCTGAGGCTCCTGGACACTCTCCTCTGGAACTCCAAGGAGCCAATTAATCCTAATGCTAGAGACAAGCCCATTTTAACGAGCCTTATGAGACATCCAGGAAACGGA
ATCTTCTGCTTTCCTGGTGCAGAGACGTGAGTTATCTTAGTGTCACAGAAGAGAACAAGAGCAACAACTCACACATCAAACCAGTTTAAAAGCCCAGAAGCGCCAGATGTGGTGCTATCA
GCACACAATCCCAGCACCCCAGAGACCCCGGCAAGAAGATTGTCCACTCCAAGTTAGCATGAGTTCCGCAGAGAAACCTTCACAGAGAGAAGGAGGGCAGGGGAGGATGAAGGGAGGGGA
GGAGGGAGACCTGGTGGAGTTTGTATTTGCACACATGAAAACCAGTTTCGCTGTTACTAAGAGCTAGGCTGCTTGATTTCATTTGCTAGTTGTCTGGATTGCTCCTGTCCTCTGCTATGA
TACTATACCTGGCAAACACGACTGAAGGATGGGCTTAAATTGGCTCAGGGTTTGAAGGTACGGTCAGCCCGTCCTGCAGGGAAGGCATGGTGTCGGCCACATGAGACAGTTGCTCGCAGT
GAAGCCGTGGTCAGGAAGTAGCAGGAGATGGATGCTGGTGCCTTCCTATTCATGTTCAGTCCACAGGCTGCCGCTGCCCGTGTTCAGGGTGGACCTTCCCACCGCAATTAACCCTATTGA
GAAACTCCCTCTTGAGCATGTCCAGAGATGTCTCCAAACACAGCCTAGGTCTTGTCACATTGACAGTCAGTATCAACAATCACACTGGTTATAGGACTTGAGTCGAGTTCCAGCATCTTT
GCTCTTATTGTTTGCACGGCACTTGGTACAGTGCCTGGACCCATAGCAAGTCTCGGGTAAGGTGTCAACACTCGCCCAAGACTGAAGAGCCACAGATGAAAAGACATGCAGCATGTTTCC
CTTGTCCTAAAAGCTCTGATCCCAGACCTTCCCAGCTTCTGGAGGTAGAGTGCTTTACATCCCCAAGGGAGAACACAAGGGACAAGGTCCTGGGATGAGCCAGCCCTATCTTCCTTCCCC
TAGGGTACAACTCCTGGAGAGCTTTCTGTGGCTTGTCACAGCCAAAGACCCTAGAAGAGCTGAGCGCTGTGCTGAGAAATGAGGTGCTGGCCAAGAAGCTGATGGATCTCTATGGAACCC
CTGATAACATTGATATCTGGTTAGGGGCCATCGCTGAACCCCTGGTCCGCAGGGGTCGGGTAGGGCCTCTGCTGACCTGCCTCCTGGGTCAGCAATTCCAGCGGATCCGAGATGGGGACA
G
GTGAGTGGGATCACTGTCTGGGCCAGGGTCAGCCCTTCCCTCCCTTAGGCAGGGTCCCCAATGTGCTTCGTGAGGTCTGACTCCACACCTCACCCTAGGAGGGGTTTTCTGCGTTCCCA
AGGGTGTCCTATGGCAGTGCGGGGAGCAGCTAGCCACTGGACTGTGTGACACGACCCTGCTCCATCCCTGTAGGTTCTGGTGGGAGAACCCTGGGGTCTTCACAGAGAAGCAGCGGGACT
CTCTACAGAAGATGTCCTTTTCGAGACTGGTCTGTGACAACACTGGCATCAACAAGGTCCCGCTGAACCCATTCCAGCCCAACAGCTACCCCCACAGCTTTGTGGACTGCTCTGCTATCG
AGAAGCTTGACCTCACCCCCTGGGCCTCAGTGAAGAAGTAG

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGAAAGTCCTTCTGCGCCTCCCAGCCCTCCTGGCTTCCCTGACCTTGCTCCAGATGGCAGCATCTACCAGAAACGCTACAAGAACTGCCACCATCCGTGAAACAGTGGATGAGGTCAAG
GTCCAGGTCAACAAGGCCTTCCTGGATTCCCGGGACAG
GCTGAAGACTGACATGAGCAACCTGGCTCCTACCGTCCGTCACCTCTCAGGGTACCTCAAGCAAGCCAAAGGCCGGACACGC
ACAGCCATCCGCGTCGGGCAGGTGTGGGAGCAGTCTCTAAAAAGACTGAGGAGGATGGTGCCCTTGACCAATGTCACAG
GCCAAGGCCTGGACTTGACTTCGCTCTCTTGGGAAGTGGGC
TGTGGTCACCCGGCTCCGACAGTGACTTGCAACATAAGCAACCCTTACCGGACCATCACTGGAGACTGTAACAACAG
GAAGAATCCAGAGCTGGGATCCGCCAACAGGGCGCTGGCTCGA
TGGCTGCCCGCAGAGTATGAAGACGGGCTCTCCCTCCCCTTCGGGTGGACGCCAGGGAAGACGCGGAACGGCTTCCCTCTACCGCAG
CCCCGTGACGTCTCTAACCAGGTCCTTGACTAT
CTGAATGAGGAGGAAATTCTGGACCAAAACAGATCTCTGCTCTTCATGCAGTGGGGTCAGATCGTGGACCACGATCTGGACTTTGCCCCTGAAACTGAGATGGGGAGCGACAACTACTCC
AAAGCCCAGTGCGATGAACTCTGCATCCAGGGAGACAACTGCTTTCCCATCATG
TTTCCCAAGGGTGACCCTAAATTGAAGACTCAGGGGAAATGCCTGCCTTTCTTCAGAGCTGGATTT
GTCTGCCCTACATCACCTTACCAATCCCTGGCCCGAGAACAAATCAATGCTCTAACTTCTTTCATGGATGCTAGCATGGTGTATGGTTCTGAGCCAAGCCTGGCAAATCGACTTCGAAAC
CTCAGCAGCCCCCTGGGTCTCATGGCTGTCAATGAAGAGGTCTCAGATCACGGACGGCCCCTCCTGCCTTTTGTCAATGTGAAGCCCAGCCCCTGTGAGGTCATCAACAGAACGGCTGGC
GTTCCCTGCTTCCTGGCAG
GAGACTCCCGCGCCTCGGAGCAGATTTTGCTGGCCACATCCCATACGCTGTTTCTCCGGGAGCACAACCGACTGGCCAGAGAGCTGAGCAGACTCAACCCC
CAGTGGGATGGTGAGAAGCTCTATCAGGAAGCCAGGAGAATCATGGGAGCCCTCATACAG
ATCATCACCTTTAGGGACTATCTCCCCATCCTACTGGGTGATGAGCTACAGAAGTGGATA
CCCCCGTACCAAGGCTACAAAGAAACTGTAGACCCGAGAATTTCCAATGTCTTCACCTTTGCTTTCCGCTTTGGCCACCTGGAGGTCCCCTCGACTGTGTCCCGCCTGGATGAGAATTAT
CAGCCATGGGGTTCAGAACCTGAGCTCCCCCTGCACAAGCTCTTCTTCAACACCTGGAGGGTGGTCAAAGATG
GTGGAATTGATCCTCTGGTTCGAGGCCTGCTGGCCAAGAAGGCCAAA
CTGGCGCATCAGGATAAAATGATGACGGGGGAACTCCGCAACATGCTGTTCCAGCCGAATCACACCGTTCACGGCTTCGACCTAGCTGCCATCAACATACAGCGCTGCCGAGACCACGGA
CAGCCTG
GGTACAACTCCTGGAGAGCTTTCTGTGGCTTGTCACAGCCAAAGACCCTAGAAGAGCTGAGCGCTGTGCTGAGAAATGAGGTGCTGGCCAAGAAGCTGATGGATCTCTATGGA
ACCCCTGATAACATTGATATCTGGTTAGGGGCCATCGCTGAACCCCTGGTCCGCAGGGGTCGGGTAGGGCCTCTGCTGACCTGCCTCCTGGGTCAGCAATTCCAGCGGATCCGAGATGGG
GACAG
GTTCTGGTGGGAGAACCCTGGGGTCTTCACAGAGAAGCAGCGGGACTCTCTACAGAAGATGTCCTTTTCGAGACTGGTCTGTGACAACACTGGCATCAACAAGGTCCCGCTGAAC
CCATTCCAGCCCAACAGCTACCCCCACAGCTTTGTGGACTGCTCTGCTATCGAGAAGCTTGACCTCACCCCCTGGGCCTCAGTGAAGAAGTAG

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