Entry information : CintPOX (CintTPO)
Entry ID 4077
Creation 2007-01-31 (Marcel Zamocky)
Last sequence changes 2007-01-31 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2011-02-01 (Christophe Dunand)
Peroxidase information: CintPOX (CintTPO)
Name (synonym) CintPOX (CintTPO)
Class Non mammalian vertebrate peroxidase    [Orthogroup: POX001]
Taxonomy Eukaryota Metazoa Chordata Ascidiacea Cionidae Ciona
Organism Ciona intestinalis    [TaxId: 7719 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CintPOX
start..stop
S start..stop
HrPOX 1025 0 29..898 43..910
OanTPO 780 0 38..869 85..917
GgaPOX03 745 0 6..821 5..838
MdoTPO 739 0 38..865 62..892
Literature and cross-references CintPOX (CintTPO)
Literature REFERENCE 1 Ogasawara,M., Di Lauro,R. and Satoh,N. Ciona intestinalis mRNA for homologue of mammlian thyroid peroxidase. (Unpublished since 1999)
REFERENCE 2 Zamocky M. et al. Phylogenetic relationship in the peroxidase-cyclooxygenase superfamily (2007 in preparation)
Protein ref. UniProtKB:   Q9XXZ7
DNA ref. GenBank:   NW_001955174.1 (48602..60640)
Cluster/Prediction ref. UniGene:   Cin.14230
Protein sequence: CintPOX (CintTPO)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   909 (892)
PWM (Da):   %s   101913.51 (99960.5) Transmb domain:   %s   o847-869i (o830-852i)
PI (pH):   %s   6.84 (6.69) Peptide Signal:   %s   cut: 18 range:18-909
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MWTKCIAVVL FCKLVFADEQ YVFDETGYEG DEFAREALRE AFQQVRRAIF RTDKSWSDEK VWRNPMTLFQ YFKRPPSEES SDMAKAGDIY HCAFDIVHDK VSNRLSRFKR RVNVTDVLSS  ATIAELAKFS GCRANGVSPT CPDTCIDNMY RTHTGECNNK VNRYWGASNN PFVRWRPAQY ENEFSTPIGW DSQRSYNGYQ LPVVRKVSND IMRTSNTRVT GDPLYSHMLV VWGQYIDHDL  DFTPQSLSTS TFQGLTDCKK TCKNESPCYP MQVPSDDPRI TTASCLPFFR SAAVCGTGDT SSLFHSIRPR EQINAVTSFV DASTVYGSTD SLNRILRNLT NDDGLMKVNT MFKDGNWDYL  PFDPNNPCVQ DPFDASGVNI PCFHAGDGRV SEHLTLSAIH TVWVREHNRI ARMLKSMNPH WSGEIIYQEA RKIVGAYHQI VHWKEYVPKI IGPAGLRMMG NYTGYRENEN PTVSNVFATA  AFRFGHATIS PQFRRLDENF NNHPQFPTIL LHEAFFSPWR MIREGGMDPI LRGLIGRPAK LIKADEMMHE ELRDKLFALQ NQVALDLASL NLQRGRDHAL PLYNDWREEC GLARANNFSD  LAGEIKDKAI RDKLEALYGH PGNIDLWLAG LSEDLMDGSR GGPVFTCLLA RQFKFLRNGD RFYYENPNVF TPNQVTALNR LSFARVLCDN SGLTRVQPDL FMLRDTSQFV DCANIPNLDL  SQWREDPAVG TCGTPPSISN GWWKKCGGGV SYRCMSGYQL AGPNEVQCMN SAFTAIPSCV DINECDAQNG GCSDRCMNTA GSYICVCNDD RMLGSDGKTC MATTVQVTPS PAVMGVTATT 
PANVTAIVVG SILGAAIFLA FCVICYLVYK NTKLHTKSKY HNTGKFSLSD PSAYDNPSAV MDNDSQTKM 

Retrieve as FASTA  
Remarks Complete sequence from genomic (19 exons, position 48620 to 60470 in AABS01000284) 2 cDNA and 17 ESTs. Ascidiae homologue to mammalian thyroid peroxidase.