Entry information : SpurPxd01
Entry ID 4101
Creation 2006-12-18 (Marcel Zamocky)
Last sequence changes 2010-11-02 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-16 (Christophe Dunand)
Peroxidase information: SpurPxd01
Name SpurPxd01
Class Peroxidasin    [Orthogroup: Pxd001]
Taxonomy Eukaryota Metazoa Echinodermata Echinoidea Strongylocentrotidae Strongylocentrotus
Organism Strongylocentrotus purpuratus    [TaxId: 7668 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpurPxd01
start..stop
S start..stop
EcabPxd01 1408 0 20..1400 20..1362
RnoPxd01 1401 0 20..1400 65..1406
HsPxd01 1400 0 20..1411 68..1407
MmPxd01 1397 0 20..1411 65..1403
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 <26163..26306 26307 N° 2 27322..27465 144 N° 3 28636..28707 72 N° 4 33064..33096 33
N° 5 35725..35826 102 N° 6 38094..38269 176 N° 7 38674..38791 118 N° 8 42484..42659 176
N° 9 50207..50476 270 N° 10 51190..51306 117 N° 11 52804..52962 159 N° 12 54436..54705 270
N° 13 55782..56051 270 N° 14 56774..58409 1636 N° 15 59545..59753 209 N° 16 60548..60813 266
N° 17 62066..62113 48  
join(<26163..26306,27322..27465,28636..28707,33064..33096,35725..35826,38094..38 269,38674..38791,42484..42659,50207..50476,51190..51306,52804..52962,54436..5470 5,55782..56051,56774..58409,59545..59753,60548..60813,62066..62113)


exon

Literature and cross-references SpurPxd01
Literature Zamocky M., Jakopitsch C., Furtmueller P.G., Dunand C., Obinger C. (2008) The peroxidase-cyclooxygenase superfamily: reconstructed evolution of the critical enzymes of the innate immune system. Proteins 72: 589-605.
Protein ref. GenBank:   XP_001186212.1
DNA ref. GenBank:   115762752   NW_001331926.1 (26163..62419)
Protein sequence: SpurPxd01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1421
PWM (Da):   %s   158571.26  
PI (pH):   %s   6.49
Sequence
Send to BLAST
Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2

Retrieve as FASTA  
Remarks Complete from genomic (16 introns). No EST (only ESTs from closely related Paracentrotus lividus available). [Comment from 2007: "Belongs to the peroxidasin clade of the peroxidase-cyclooxygenase superfamily; region:37-137 leucine rich repeats; region 175-213 immunoglobulin domain cell adhesion molecule, region 324-408 immunoglobulin domain, region 505-591 immunoglobulin domain, REGION 721-1273 animal heme PEROXIDASE domain, pfam03098."]