Entry information : SpurPxd01
Entry ID 4101
Creation 2006-12-18 (Marcel Zamocky)
Last sequence changes 2010-11-02 (Marcel Zamocky)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-02-16 (Christophe Dunand)
Peroxidase information: SpurPxd01
Name SpurPxd01
Class Peroxidasin    [Orthogroup: Pxd001]
Taxonomy Eukaryota Metazoa Echinodermata Echinoidea Strongylocentrotidae Strongylocentrotus
Organism Strongylocentrotus purpuratus    [TaxId: 7668 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SpurPxd01
start..stop
S start..stop
EcabPxd01 1408 0 20..1400 20..1362
RnoPxd01 1401 0 20..1400 65..1406
HsPxd01 1400 0 20..1411 68..1407
MmPxd01 1397 0 20..1411 65..1403
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 <26163..26306 26307 N° 2 27322..27465 144 N° 3 28636..28707 72 N° 4 33064..33096 33
N° 5 35725..35826 102 N° 6 38094..38269 176 N° 7 38674..38791 118 N° 8 42484..42659 176
N° 9 50207..50476 270 N° 10 51190..51306 117 N° 11 52804..52962 159 N° 12 54436..54705 270
N° 13 55782..56051 270 N° 14 56774..58409 1636 N° 15 59545..59753 209 N° 16 60548..60813 266
N° 17 62066..62113 48  
join(<26163..26306,27322..27465,28636..28707,33064..33096,35725..35826,38094..38 269,38674..38791,42484..42659,50207..50476,51190..51306,52804..52962,54436..5470 5,55782..56051,56774..58409,59545..59753,60548..60813,62066..62113)


exon

Literature and cross-references SpurPxd01
Literature Zamocky M., Jakopitsch C., Furtmueller P.G., Dunand C., Obinger C. (2008) The peroxidase-cyclooxygenase superfamily: reconstructed evolution of the critical enzymes of the innate immune system. Proteins 72: 589-605.
Protein ref. GenBank:   XP_001186212.1
DNA ref. GenBank:   115762752   NW_001331926.1 (26163..62419)
Protein sequence: SpurPxd01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   1421
PWM (Da):   %s   158571.26  
PI (pH):   %s   6.49
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MSVGMIINGN KGARICEGTD LRFNQISEIP TGSFRNLPNV STLLLNNNNI RRIHRGAFSG LRHLKYLYLY KNRIADIEER AFEGLNNLEQ LYLYSNQLKK IPPGTFSNLP SLERLFLNNN  NISILEPGTF YGLGSLKRLR LDSNQLICHF GTQPLACLNA MLHSGSRGKD SAFYKVGGLM GVYGKEILPN RGIDHKYNIL DDGTLMIQNA SGDDEGQYEC MARNALGEVK TQPVSLRYFG  APKRPHFVVE PHNVDATEGN NVYFSCRAMG DPEPEIVWLH DSKEILPNRG IDHKYNILDD GTLMIQNASG DDEGQYECMA RNALGEVKTQ PVSLRYFGAP RAPVFTFVPE DVEFRESTSA  VIHCAANGYP LPRISWTKEG ANVVENTRFR ILSTGSLHIS NTHFSDAGDY RCDATNSLDT LSATATLSVL VPPTFELAPQ PQSAIEGSTV ELHCRPQGYP LPVIQWRKDS TSLPDDRKFL  ILASGTLRII RVSQEDAGNY ECIAVNKAGQ RQSMAQVEIR ARVPPVFNQS PSDLTVVAGA TIRLPCSASG DPEPLITWTK DGVQITESAK FSISEAGHLA IHDVGVDDDG RYECAARNTI  GYASTDMELT VNVSIGTSRE GDSFVNSAIA EAIRNIDAAI NETNRNLLDG KKPRTPHDLL TLFRFPSIEA MSIARAAEVF ERTLELIHNH IEAGMQVNLT GIDFTYNDLV SPRFLNLISN  LSQCTAHTKI TNCSDVCFHK KYRTYDGTCN NLQHPEWGAS LTPFKRLLKP IYENGFNTPV GWNTTHQYNG FTKPSARGVS SGVVSAAEIT SHKDYTHMLM QWGQFLDHDM DFTVTSLSRA  RFSDGVECKD TCDNQVPCFP IQVPEGDRRI HRTQCIEFTR SSAVCGSGST SVFFNRIMPR EQINQITSYI DASNVYGSHK ELTDNLRDLN NDYGRLKVGL QMGSGRFLLP YNRDTPIDCD  RDEDESPIPC FLAGDFRANE QLGLLSLHTV WMREHNRIAQ KLREVNTHWT GENVFQETRK IIGAAMQHIT YTSWLPKVLG PRGMEMIGKY EGYNPNTDAA IFNAFATAAF RFGHSLVQPI  VKRLNSTFQP ISHGNLPLHR AFFSPYRIVD QGGIDPVLRG LFGSAMKKPD PSEMVNTELT EHLFEMVHEI ALDLAAINIQ RGRDHALPGY NDYRVLCNMT AARTFNDISS EIGNPEVRRK  LEELYGHPGN IDLFVGGLAE DHLEGGLLGP TFTCLLAKQF HRLREGDRFW YENPGVFSPE QLTQIKQISL ARVLCDNGDS IDRVNQDVFL LADYPTGYKK CSSVPSMDLR LWAECSEGAA 
LAGTFSRSRR SVPTYSQPAP KTAGSQKAIP KDPSRRQKFV EVEIDAVETI EGTTQEEQTV SLETQVTEMR AQMREMQASI DELQKQVQLL ERGRRGKRHR K 

Retrieve as FASTA  
Remarks Complete from genomic (16 introns). No EST (only ESTs from closely related Paracentrotus lividus available). [Comment from 2007: "Belongs to the peroxidasin clade of the peroxidase-cyclooxygenase superfamily; region:37-137 leucine rich repeats; region 175-213 immunoglobulin domain cell adhesion molecule, region 324-408 immunoglobulin domain, region 505-591 immunoglobulin domain, REGION 721-1273 animal heme PEROXIDASE domain, pfam03098."]