Entry information : SfoPGHS02
Entry ID 4134
Creation 2006-12-06 (Christophe Dunand)
Last sequence changes 2016-01-20 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-20 (Christophe Dunand)
Peroxidase information: SfoPGHS02
Name SfoPGHS02
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Actinopterygii Salmonidae Salvelinus
Organism Salvelinus fontinalis (Brook trout)    [TaxId: 8038 ]
Cellular localisation N/D
Tissue type Ovaries
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SfoPGHS02
start..stop
S start..stop
OmyPGHS02 1235 0 1..607 1..607
OmyPGHS02-1B 1014 0 1..607 1..609
PretPGHS03 1008 0 1..607 8..615
FhePGHS01 1003 0 1..607 1..610
Literature and cross-references SfoPGHS02
Literature Roberts S.B et al., Cloning and characterization of prostaglandin endoperoxide synthase-1 and -2 from the brook trout ovary. Mol. Cell. Endocrinol. 160:89-97(2000).
Protein ref. GenBank:   AAD45896.1 UniProtKB:   Q9PW89
mRNA ref. GenBank:   AF158373.1
Protein sequence: SfoPGHS02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   607 (587)
PWM (Da):   %s   68992.62 (66783.5)  
PI (pH):   %s   7.17 (7.19) Peptide Signal:   %s   cut: 21 range:21-607
Sequence
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Send to Peroxiscan
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MNKVVCIILL LTVGLYFCEG VDPCCAQPCE NRGLCNSKGF DNYECDCTRT GYYGKNCTTP EFLTWIKISL KPAPNTVHYI LTHYKGLWNV INKITFVRNA IMSYVLTSRS HLVDSPPTYN  ADYGYKSWEA YSNLSYYTRT LPPLPKDCPT PMGTAGRAVL PDVKLVVEKV LLRKRFIPDP QGSNLMFAFF AQHFTHQFFK SDLKKGPAFT KALGHGVDLN HVYGDSLERQ HKLRLFKDGK  LKYQVLNGEV YPPLVREVGA EMHYPPQVPE EHRFAVGHEH FGLVPGLMMY ATIWLREHNR VCDVLRQEHP EWDDERIFQT TRLILIGETI KIVIEDYVQH LSGYHFQLKF DPELLFNQRF  QYQNRIAAEF NTLYHWHPLM PDTFSIEDRA YTYPQFVFNN SLVTEHGITN LVESFTKQIA GRVAGGRNLP PALVAVAAKA LEHSRDMRYQ SLNAYRKRFN MRAYTSFEDL TGETELAAEL  ESLYGDVDAV ELYPGLLVER PRPNAVFGET MVEMGAPYSL KGLLGNPICS PEYWMPSTFG GSVGFDIVNT ASLERLVCSN VKGSCPMVSF QVPDFLRAFE SASVNTSEAH LRGMNPGVVF 
KERTLEL 

Retrieve as FASTA  
Remarks Complete sequence from 1 cDNA.
CDS
Send to BLAST
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ATGAATAAAG TAGTCTGTAT AATTTTGCTC TTGACTGTGG GGCTCTATTT CTGCGAAGGA GTTGATCCCT GCTGTGCACA GCCCTGTGAA AATAGGGGGT TATGTAATTC AAAAGGCTTT  GACAACTATG AGTGCGACTG CACAAGGACG GGATATTATG GAAAGAACTG CACAACTCCT GAATTCCTAA CATGGATTAA AATATCATTG AAACCAGCTC CGAACACTGT TCACTACATC  CTTACTCACT ACAAAGGGTT GTGGAACGTC ATCAACAAGA TCACCTTTGT GAGAAACGCT ATAATGAGCT ATGTCCTGAC ATCCCGCTCA CATTTGGTGG ACAGCCCACC GACTTACAAT  GCTGATTATG GCTACAAAAG CTGGGAGGCC TACTCCAACC TGTCTTACTA CACACGGACG CTCCCCCCAT TGCCAAAGGA CTGCCCTACA CCTATGGGAA CCGCAGGAAG AGCAGTGCTC  CCAGATGTCA AACTTGTGGT GGAGAAGGTT TTGTTGAGGA AGCGGTTTAT TCCGGATCCT CAGGGTTCCA ATCTCATGTT CGCCTTCTTC GCCCAGCACT TCACCCACCA GTTCTTCAAA  TCAGACTTAA AGAAAGGACC AGCTTTCACC AAAGCCTTGG GCCATGGCGT GGACTTAAAC CATGTTTATG GAGACAGTCT GGAGAGACAG CACAAGCTGA GGCTGTTCAA GGATGGCAAA  CTGAAGTATC AGGTTTTGAA TGGCGAGGTC TACCCCCCAT TGGTAAGGGA GGTTGGGGCC GAGATGCACT ACCCACCCCA AGTGCCCGAG GAGCACCGCT TCGCTGTGGG CCACGAGCAT  TTTGGCTTGG TCCCCGGCCT CATGATGTAT GCCACCATCT GGCTGCGCGA GCACAACCGT GTCTGTGACG TCCTGAGGCA GGAGCATCCC GAATGGGACG ATGAACGCAT CTTCCAGACC  ACACGGCTCA TCCTAATTGG CGAGACCATT AAGATCGTGA TCGAGGACTA TGTCCAGCAC CTGAGTGGCT ACCACTTCCA GCTCAAGTTC GACCCGGAGC TCCTCTTCAA CCAGCGTTTC  CAGTACCAGA ACCGTATCGC AGCCGAGTTC AATACCCTGT ACCACTGGCA CCCGCTGATG CCTGACACCT TCAGCATTGA GGACCGTGCC TACACCTACC CCCAGTTTGT CTTCAACAAC  TCCCTGGTCA CAGAGCACGG CATCACAAAC CTGGTGGAGT CCTTCACCAA GCAGATTGCT GGAAGGGTGG CTGGTGGACG GAACCTGCCT CCTGCACTAG TGGCCGTGGC AGCTAAGGCC  CTGGAGCACA GCAGAGACAT GCGTTACCAG TCCCTCAACG CCTACAGGAA ACGCTTCAAC ATGAGGGCCT ACACCTCCTT TGAGGACCTC ACAGGAGAGA CAGAGCTGGC TGCAGAACTA  GAGAGTCTAT ATGGGGACGT AGATGCTGTG GAGCTGTACC CAGGCCTTCT GGTGGAGCGC CCCAGACCTA ACGCTGTTTT CGGGGAGACT ATGGTCGAGA TGGGTGCACC CTACTCCCTG  AAAGGTCTCC TGGGAAACCC CATTTGCTCG CCGGAATACT GGATGCCCAG CACGTTCGGA GGGAGTGTGG GCTTTGACAT CGTCAACACT GCTTCATTGG AGAGGCTGGT GTGCAGCAAT  GTCAAGGGCT CTTGTCCGAT GGTGTCCTTT CAAGTGCCTG ATTTTTTGAG AGCATTTGAG TCGGCGTCAG TCAACACAAG TGAGGCACAC CTGAGGGGCA TGAACCCAGG TGTTGTGTTC 
AAAGAAAGGA CTTTAGAGCT T 

Retrieve as FASTA