Entry information : SfoPGHS01
Entry ID 4135
Creation 2006-12-06 (Christophe Dunand)
Last sequence changes 2016-01-20 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-20 (Christophe Dunand)
Peroxidase information: SfoPGHS01
Name SfoPGHS01
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Actinopterygii Salmonidae Salvelinus
Organism Salvelinus fontinalis (Brook trout)    [TaxId: 8038 ]
Cellular localisation N/D
Tissue type Ovaries
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value SfoPGHS01
start..stop
S start..stop
OmyPGHS01 1175 0 1..598 28..624
DrPGHS01 972 0 9..589 10..589
PretPGHS01 962 0 1..598 1..595
MunPGHS01 955 0 1..587 1..585
Literature and cross-references SfoPGHS01
Literature Roberts S.B. et al., Cloning and characterization of prostaglandin endoperoxide synthase-1 and -2 from the brook trout ovary. Mol. Cell. Endocrinol. 160:89-97(2000).
Protein ref. GenBank:   AAF14529.1 UniProtKB:   Q9PTN3
mRNA ref. GenBank:   AF158374.1
Protein sequence: SfoPGHS01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   598 (576)
PWM (Da):   %s   68518.44 (66050.1)  
PI (pH):   %s   7.79 (7.35) Peptide Signal:   %s   cut: 23 range:23-598
Sequence
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Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MRGLVVCVWA CILLQRLPTC RGEEVKDVST NVVNPCCYYP CQNWALCVRF GIDRYECDCT RTGFYGQNCT IPEFWTRIHQ QLKPSPDVVH YILTHFHWLW NLINRTFMRD WLMRMVLTVR  SNLIPSPPTF NSKYGYLSWE SYSNVSYYTR ILPPVPEDCP TPMGTKGKSV LPDPKLVVEK FLLRRQFRPD PKGTNLMFAF FAQHFTHQFF KTRNSMGLGF TSALGHGVDA GNVYGDNLVR  QLNLRLLKDG KMKYQVVKGE VYPPTVAEAP VNMRYPQGTP VGQRMAIGQE VFGLLPGLTM YATLWLREHN RVCDILKAEH PTWGDEQLFQ TARLIVIGET IRIVIEEYVQ HLSGYLLDLK  FDPVLLFKST FQYRNRIAVE FNQLYHWHPL MPDSFHIDGD VVSYSQFIFN TSIVTHYGVE KLVDAFSRQY AGQIGGGRNI HPVVTKVAEG VIEESRTLRL QPFNEYRKRF NLKPYTSFSD 
FTGEEEMARE LEELYGDIDA LEFYPALMLE KTRPNAIFGE SMVEMGAPFS LKGLLGNPIC SPEYWKPSTF GGQTGFDIVN SASLERLVCL NTNWCPYVAF NVPPAGQEPP PRKQSTEL 

Retrieve as FASTA  
Remarks Complete sequence from cDNA.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGAGAGGTT TGGTCGTGTG CGTCTGGGCA TGTATCCTGC TGCAAAGGTT ACCAACATGT CGCGGGGAGG AGGTGAAAGA CGTCAGTACA AATGTTGTGA ATCCCTGTTG CTATTACCCC  TGTCAGAACT GGGCTTTGTG TGTCAGGTTT GGCATTGACC GCTATGAATG TGACTGCACT CGCACCGGCT TCTATGGACA GAATTGCACT ATCCCTGAGT TCTGGACGAG GATCCACCAG  CAGCTGAAGC CGAGCCCTGA CGTGGTCCAC TACATCCTCA CACACTTCCA CTGGCTGTGG AACCTCATCA ACAGGACCTT CATGCGGGAC TGGCTCATGA GGATGGTCCT CACAGTCAGA  TCCAACCTTA TTCCCAGTCC TCCTACCTTC AACTCCAAGT ATGGATACCT CAGCTGGGAG TCCTACTCCA ATGTTTCCTA TTATACCCGT ATCCTACCCC CTGTGCCTGA AGACTGCCCC  ACCCCTATGG GTACCAAAGG AAAGTCTGTC CTTCCAGACC CAAAGCTGGT GGTGGAGAAG TTTCTTCTGA GGAGGCAATT CAGGCCGGAT CCAAAGGGAA CCAACCTAAT GTTTGCTTTC  TTCGCTCAGC ACTTCACCCA TCAGTTCTTC AAGACCCGAA ACAGCATGGG CTTGGGCTTT ACCAGCGCTC TGGGGCATGG GGTGGATGCC GGCAATGTCT ACGGAGATAA TCTGGTGCGT  CAACTGAACC TCCGGCTTCT TAAAGACGGA AAGATGAAAT ATCAGGTGGT TAAAGGTGAG GTGTACCCTC CTACGGTGGC CGAGGCACCG GTGAATATGA GATACCCTCA AGGCACTCCC  GTGGGGCAGC GTATGGCCAT CGGGCAGGAG GTGTTTGGGC TGTTGCCAGG CCTCACCATG TACGCCACCC TGTGGCTGAG AGAACACAAC CGCGTCTGTG ACATCCTGAA GGCCGAGCAC  CCCACCTGGG GGGACGAGCA GCTCTTCCAG ACCGCCAGGC TCATCGTAAT AGGTGAGACC ATCCGGATAG TGATTGAGGA GTACGTGCAG CACCTGAGTG GCTACCTGTT GGATCTGAAG  TTTGACCCAG TCCTGCTCTT CAAGTCCACG TTCCAGTACA GGAACCGCAT CGCTGTGGAG TTCAACCAGC TGTACCACTG GCACCCCCTG ATGCCAGACA GCTTCCACAT AGACGGAGAC  GTGGTGTCCT ACTCCCAGTT CATCTTCAAC ACCTCCATCG TCACACACTA CGGGGTGGAG AAACTGGTGG ACGCTTTCTC ACGCCAGTAT GCTGGACAGA TAGGAGGAGG TCGAAACATC  CACCCAGTGG TGACCAAGGT GGCCGAGGGG GTTATTGAAG AGTCCAGGAC TCTGCGTCTC CAACCCTTCA ACGAGTACAG GAAGAGGTTC AACCTGAAGC CCTACACATC TTTCTCTGAC  TTCACTGGTG AGGAGGAGAT GGCCAGGGAG CTGGAGGAGC TCTATGGTGA CATCGATGCG CTGGAGTTCT ACCCCGCCCT CATGCTGGAG AAGACACGCC CCAACGCCAT ATTTGGTGAG  AGCATGGTGG AGATGGGGGC TCCGTTCTCC CTGAAAGGCC TTCTGGGTAA CCCCATCTGT TCCCCTGAGT ACTGGAAGCC CAGCACATTT GGAGGCCAGA CAGGCTTTGA TATAGTCAAC 
TCAGCCTCGC TTGAGAGACT GGTGTGTCTG AACACTAATT GGTGTCCGTA CGTAGCCTTC AATGTCCCTC CAGCCGGGCA GGAGCCGCCA CCAAGGAAAC AGTCCACTGA ACTG 

Retrieve as FASTA