Entry information : NcHalPrx01
Entry ID 4199
Creation 2007-01-26 (Filippo Passardi)
Last sequence changes 2007-01-26 (Filippo Passardi)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-04-25 (Catherine Mathe (Scipio))
Peroxidase information: NcHalPrx01
Name NcHalPrx01
Class Haloperoxidase (haem)    [Orthogroup: HalPrx001]
Taxonomy Eukaryota Fungi Ascomycota Sordariomycetes Sordariaceae Neurospora
Organism Neurospora crassa    [TaxId: 5141 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value NcHalPrx01
start..stop
S start..stop
PangHalPrx04 261 5e-88 11..265 2..253
MgrHalPrx01 185 4e-58 43..265 42..253
GzHalPrx02 164 8e-51 46..233 25..201
AorHalPrx01 144 3e-42 42..262 18..229
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 700623..700782 160 N° 2 699972..700508 537 N° 3 699602..699723 122  
complement(join(699602..699723,699972..700508,700623..700782))


exon

Literature and cross-references NcHalPrx01
Literature Schulte U. et al. German Neurospora genome,project. unpublished
Protein ref. UniProtKB:   Q870W6
DNA ref. JGI genome:   supercont10.5 (700782..699602)
Protein sequence: NcHalPrx01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   272
PWM (Da):   %s   29835.16  
PI (pH):   %s   5.83
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MSSSTNITSTALGIKVMSFLTSILAVGIEAYAKLTGKNEDTEDHSWQKPGPDDRRSPCPMLNALANHGYLPHSGRDISLAQLMHGLQRGINLSPNATLIVGIKALQASTTGHWTTFHLSDLNTHGVIEHDGSLSRADLSAPPNYDNHTFVPEIWAATLQVLGENEERISIEKAARMRLARIDEEEGPKRGNPNFSMSSEDKRFSAIETALYLRVFGRGTEGGAETRWVRVLFEEERLPIEEGFKRSDKPLTIAEVLELQRKVEAVGATPDPK

Retrieve as FASTA  
Remarks Complete sequence from Genomic (chromo 2 and 2 introns).
DNA
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTCCTCTACCAATATAACCTCCACAGCCCTCGGCATCAAAGTCATGTCCTTCCTCACCTCCATCTTGGCAGTCGGCATCGAAGCCTACGCCAAACTTACGGGGAAAAACGAAGAT
ACAGAGGACCATTCATGGCAGAAGCCTGGACCTGACGACC
GTAACCACTTCCCCTTCCTCTTCCCTTTCTTTTCTTTTTTTCCTTTTTTTTTTTCTCTCTTCCTCGCTCCGCTCGATCAC
CCACCCTCCTATAGCGCTAACAAACGACACGCAGGCCGCTCCCCCTGCCCCATGCTCAACGCCCTCGCCAACCACGGCTACCTCCCGCACTCGGGCCGCGACATCTCCCTCGCCCAACTC
ATGCACGGTCTACAGAGGGGAATCAACCTCTCCCCCAACGCTACTTTAATCGTCGGCATCAAAGCCCTCCAAGCCAGCACCACGGGGCACTGGACCACCTTCCACCTATCCGACCTCAAC
ACGCACGGCGTCATCGAACACGACGGGTCCTTGTCCCGCGCGGACTTGTCGGCCCCGCCGAATTACGATAACCATACGTTTGTCCCGGAGATTTGGGCGGCTACGTTGCAGGTTTTGGGT
GAGAATGAAGAAAGAATTAGTATCGAGAAGGCGGCGAGGATGCGCTTGGCCAGAATTGATGAAGAAGAGGGACCGAAGAGAGGGAATCCGAATTTCAGCATGAGTAGTGAAGACAAGAGG
TTTAGTGCGATTGAGACGGCGTTGTATTTGAGGGTGTTTGGAAGGGGGACCGAGGGCGGGGCGGAGACGAGGTGGGTGAGGGTTTTGTTTG
GTGAGTTTTTTTTTTTTTTTTTTTTTTTT
TTTTTTTTTTTTAATTTTCTTTCATTTTTGGCTTTTTACGTCTAGATGGTGGATGAAGGGATCATGGGATACTAGGACGATAAAAGGAGTGGGCGATGATGGGAGGTGGTGGTGGATGGG
AAGGAGATTTTGTAGTGATGATGCGGAGGGTGAAAATCACAGCAGGGCGCTCGCTGTGTGCTTTGGTGCAGTGGAACACAGCGCTAACAAATTGAACAGAGGAAGAACGACTCCCGATTG
AAGAGGGATTCAAGAGATCCGACAAACCCCTAACGATTGCCGAGGTTTTGGAGTTGCAGAGAAAGGTCGAGGCTGTCGGTGCTACTCCTGATCCGAAGTAA

Retrieve as FASTA  
CDS
Send to BLAST
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
ATGTCCTCCTCTACCAATATAACCTCCACAGCCCTCGGCATCAAAGTCATGTCCTTCCTCACCTCCATCTTGGCAGTCGGCATCGAAGCCTACGCCAAACTTACGGGGAAAAACGAAGAT
ACAGAGGACCATTCATGGCAGAAGCCTGGACCTGACGACC
GCCGCTCCCCCTGCCCCATGCTCAACGCCCTCGCCAACCACGGCTACCTCCCGCACTCGGGCCGCGACATCTCCCTCGCC
CAACTCATGCACGGTCTACAGAGGGGAATCAACCTCTCCCCCAACGCTACTTTAATCGTCGGCATCAAAGCCCTCCAAGCCAGCACCACGGGGCACTGGACCACCTTCCACCTATCCGAC
CTCAACACGCACGGCGTCATCGAACACGACGGGTCCTTGTCCCGCGCGGACTTGTCGGCCCCGCCGAATTACGATAACCATACGTTTGTCCCGGAGATTTGGGCGGCTACGTTGCAGGTT
TTGGGTGAGAATGAAGAAAGAATTAGTATCGAGAAGGCGGCGAGGATGCGCTTGGCCAGAATTGATGAAGAAGAGGGACCGAAGAGAGGGAATCCGAATTTCAGCATGAGTAGTGAAGAC
AAGAGGTTTAGTGCGATTGAGACGGCGTTGTATTTGAGGGTGTTTGGAAGGGGGACCGAGGGCGGGGCGGAGACGAGGTGGGTGAGGGTTTTGTTTG
AGGAAGAACGACTCCCGATTGAA
GAGGGATTCAAGAGATCCGACAAACCCCTAACGATTGCCGAGGTTTTGGAGTTGCAGAGAAAGGTCGAGGCTGTCGGTGCTACTCCTGATCCGAAGTAA

Retrieve as FASTA