Entry information : GfrPGHS01 ( CoxA)
Entry ID 4213
Creation 2006-12-22 (Christophe Dunand)
Last sequence changes 2016-01-21 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-21 (Christophe Dunand)
Peroxidase information: GfrPGHS01 ( CoxA)
Name (synonym) GfrPGHS01 ( CoxA)
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Cnidaria Anthozoa Nephtheidae Gersemia
Organism Gersemia fruticosa    [TaxId: 134440 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value GfrPGHS01
start..stop
S start..stop
GfrPGHS02 1174 0 1..589 8..596
PhoPGHS02 1033 0 21..589 22..592
PhoPGHS01 1019 0 21..589 22..592
PretPGHS03 638 0 5..573 10..581
Literature and cross-references GfrPGHS01 ( CoxA)
Literature Koljak,R. et al., The basis of prostaglandin synthesis in coral: molecular cloning and expression of a cyclooxygenase from the Arctic soft coral Gersemia fruticosa. J. Biol. Chem. 276 (10), 7033-7040 (2001)
Protein ref. GenBank:   AAF93168.1 UniProtKB:   Q9GPF4
mRNA ref. GenBank:   AY004222.1
Protein sequence: GfrPGHS01 ( CoxA)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   589 (567)
PWM (Da):   %s   67770.06 (65406.8)  
PI (pH):   %s   6.71 (6.71) Peptide Signal:   %s   cut: 23 range:23-589
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVAKFVVFLG LQLILCSVVC EAVNPCCSFP CESGAVCVED GDKYTCDCTR TGHYGVNCEK PNWSTWFKAL IAPSEETKHF ILTHFKWFWW IVNNVPFIRN TVMKAAYFSR TDFVPVPHAY  TSYHDYATME AHYNRSYFAR TLPPVPKNCP TPFGVAGKKE LPPAEEVANK FLKRGKFKTD HTSTSWLFMF FAQHFTHEFF KTIYHSPAFT WGNHGVDVSH IYGQDMERQN KLRSFEDGKL  KSQTINGEEW PPYLKDVDNV TMQYPPNTPE DQKFALGHPF YSMLPGLFMY ASIWLREHNR VCTILRKEHP HWVDERLYQT GKLIITGELI KIVIEDYVNH LANYNLKLTY NPELVFDHGY  DYDNRIHVEF NHMYHWHPFS PDEYNISGST YSIQDFMYHP EIVVKHGMSS FVDSMSKGLC GQMSHHNHGA YTLDVAVEVI KHQRELRMQS FNNYRKHFAL EPYKSFEELT GDPKMSAELQ 
EVYGDVNAVD LYVGFFLEKG LTTSPFGITM IAFGAPYSLR GLLSNPVSSP TYWKPSTFGG DVGFDMVKTA SLEKLFCQNI AGECPLVTFT VPDDIARETR KVLEARDEL 

Retrieve as FASTA  
Remarks Complete sequence from mRNA. Duplicated form of GfrPGHS02.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGTGGCCA AGTTTGTCGT ATTCCTTGGC TTACAATTGA TATTGTGTAG CGTTGTTTGT GAAGCTGTCA ACCCATGCTG TTCGTTCCCA TGCGAGAGTG GTGCAGTGTG TGTTGAGGAC  GGAGATAAAT ACACCTGCGA CTGCACAAGA ACTGGCCATT ATGGAGTCAA CTGTGAGAAA CCAAACTGGT CAACGTGGTT CAAGGCATTG ATCGCACCGA GTGAAGAAAC AAAGCATTTC  ATTCTTACGC ATTTCAAGTG GTTCTGGTGG ATAGTCAACA ATGTTCCGTT CATTCGAAAT ACTGTCATGA AGGCCGCCTA CTTTTCTCGC ACTGACTTTG TACCTGTACC ACATGCATAC  ACGAGCTATC ACGACTATGC AACAATGGAG GCACATTACA ACAGATCTTA CTTCGCAAGG ACACTGCCTC CTGTACCCAA GAACTGTCCA ACACCATTTG GAGTTGCAGG TAAAAAAGAG  CTCCCTCCTG CGGAAGAAGT CGCAAACAAA TTCCTAAAGC GAGGAAAGTT TAAAACCGAT CACACCAGTA CATCCTGGCT CTTCATGTTC TTTGCTCAGC ATTTCACTCA CGAGTTCTTC  AAGACCATCT ACCACAGTCC AGCCTTCACC TGGGGGAATC ATGGAGTGGA TGTCTCTCAT ATTTATGGTC AGGATATGGA GCGACAAAAC AAGTTGCGAA GCTTTGAAGA TGGAAAATTG  AAGTCACAGA CGATAAATGG TGAAGAGTGG CCACCATATT TAAAAGATGT AGACAATGTT ACGATGCAAT ATCCGCCCAA TACACCCGAG GATCAAAAAT TTGCCTTGGG TCATCCATTC  TATAGCATGT TGCCTGGACT GTTCATGTAT GCCTCAATCT GGCTGAGGGA GCATAATCGA GTTTGTACTA TCCTGAGGAA AGAACATCCA CATTGGGTGG ATGAGAGACT GTACCAAACT  GGCAAACTCA TTATTACTGG TGAACTGATC AAAATTGTGA TTGAAGATTA CGTCAACCAC TTGGCTAACT ATAACTTAAA GCTCACATAC AACCCAGAGC TAGTGTTTGA CCATGGCTAT  GACTACGACA ATCGTATCCA CGTCGAGTTC AATCATATGT ATCATTGGCA TCCGTTTAGT CCCGACGAGT ACAATATCAG TGGATCAACT TACTCCATTC AGGACTTTAT GTATCATCCA  GAAATTGTCG TCAAACATGG GATGAGCTCT TTTGTAGACT CGATGTCTAA AGGCTTATGT GGACAGATGT CACATCATAA CCATGGCGCG TATACCTTGG ACGTAGCAGT TGAAGTTATA  AAGCATCAAC GTGAATTGAG GATGCAGTCT TTCAACAATT ATCGTAAACA TTTTGCTTTG GAGCCCTACA AATCATTCGA GGAATTGACT GGTGATCCTA AGATGTCAGC GGAGTTGCAA  GAAGTTTATG GTGATGTCAA TGCTGTTGAC TTGTATGTTG GTTTCTTCCT TGAGAAGGGT TTGACAACCT CTCCATTTGG TATCACCATG ATTGCATTTG GTGCTCCGTA CTCCCTGAGA  GGATTGCTTT CTAATCCTGT ATCTAGTCCA ACTTACTGGA AGCCCTCCAC ATTTGGTGGA GATGTTGGTT TTGATATGGT GAAGACAGCT AGTCTTGAGA AGTTGTTCTG TCAAAATATA 
GCTGGCGAGT GTCCCCTGGT CACCTTCACA GTACCCGATG ACATCGCTCG TGAAACTAGG AAGGTTCTTG AAGCAAGAGA TGAACTT 

Retrieve as FASTA