Entry information : CintPGHS01
Entry ID 4218
Creation 2007-01-12 (Christophe Dunand)
Last sequence changes 2007-01-12 (Christophe Dunand)
Sequence status complete
Reviewer Filippo Passardi
Last annotation changes 2007-01-12 (Filippo Passardi)
Peroxidase information: CintPGHS01
Name CintPGHS01
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Ascidiacea Cionidae Ciona
Organism Ciona intestinalis    [TaxId: 7719 ]
Cellular localisation N/D
Tissue type Whole animal
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value CintPGHS01
start..stop
S start..stop
CintPGHS02 580 0 17..490 20..491
CfaPGHS02 496 6e-172 29..490 19..481
SscPGHS02 492 2e-170 30..490 20..481
PretPGHS03 491 8e-170 29..490 29..491
Literature and cross-references CintPGHS01
Literature Satou,Y., Yamada,L., Mochizuki,Y., Takatori,N., Kawashima,T., Sasaki,A., Hamaguchi,M., Awazu,S., Yagi,K., Sasakura,Y., Nakayama,A., Ishikawa,H., Inaba,K. and Satoh,N. A cDNA resource from the basal chordate Ciona intestinalis. Genesis 33 (4), 153-154 (2002)
DNA sequence http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=Nucleotide&list_uids=26554608&dopt=GenBank
Cluster/Prediction ref. UniGene:   Cin.1846
Protein sequence: CintPGHS01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   492 (470)
PWM (Da):   %s   56527.25 (54263.0)  
PI (pH):   %s   8.12 (8.26) Peptide Signal:   %s   cut: 23 range:23-492
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MVAAVTFLGV LTFLLLSNDA STNTDVHYDP CCSFPCQHQS VCTSPDMISY QCDCTGTGYY GDECQHPYLS TRIKKWIKPS KSTTHYILTH FKWVWTIVNN VSWLRKTLMK AVLAMRVSSV  TEPSPYRGLS SYPSWSAYIN DTMYVRTLPP VPTNCPTPMG IKGKPELPEI SVLLEKFFKR RTFQPCPQRT SVLFPFFAQH FTHMFFKTDP MKGMPYQWGD QLVDLSQIYG HGEKRQHELR  SHVNGKLKVS LVDGHEFPPL SNQTTANMSN INLLPQEYQF VFGHQGFSLM PTFLIWSTIW LREHNRICDL IKEKNPAWDD ERIFQTARLV LTGETIKIVI EDYVQHLSGF HYKLLYDPEL  VQGGSHSFHN QIHVEFQLLY HWHALMPDQI EFNGKSYTMK RLLFNPEPVV KGGLKRTIED LSNQWAGQVA GGKTQGAATL HVAGLAIKNG RDLRMQSFNA YKEKFEMKKY TTFQELTGEE 
EMAAQLQELY EI 

Retrieve as FASTA  
Remarks Complete sequence from genomic, 1 cDNA and 68 ESTs.