Entry information : PiHalPrx02
Entry ID 4222
Creation 2007-01-26 (Filippo Passardi)
Last sequence changes 2016-01-21 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-21 (Christophe Dunand)
Peroxidase information: PiHalPrx02
Name PiHalPrx02
Class Haloperoxidase (haem)    [Orthogroup: HalPrx001]
Taxonomy Eukaryota Phytophthora
Organism Phytophthora infestans    [TaxId: 4787 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value PiHalPrx02
start..stop
S start..stop
PiHalPrx02_88069 319 2e-112 90..254 1..165
PiHalPrx01 182 2e-57 29..251 31..255
PnoHalPrx02 102 2e-26 56..239 35..227
SAcoHalPrx02 100 6e-25 47..230 63..250
Gene structure Fichier Exons
ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize ExonStart..EndSize
N° 1 45421..46185 765  
complement(join(45421..46185))


exon

Literature and cross-references PiHalPrx02
Literature Torto,T.A et al., EST Mining and Functional Expression Assays Identify Extracellular Elicitor Proteins from Phytophthora. Unpublished
Protein ref. GenBank:   AAN31510.1 UniProtKB:   Q8H6Y6
DNA ref. GenBank:   AATU01001318.1
mRNA ref. GenBank:   AF424685.1
Protein sequence: PiHalPrx02
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   254 (231)
PWM (Da):   %s   26821.74 (24681.7)  
PI (pH):   %s   7.74 (7.83) Peptide Signal:   %s   cut: 24 range:24-254
Sequence
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Send to Peroxiscan
.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
MVSCASIVAV AVAVASFVSS SSSRILDPNK LAVGEFFRPS GHVVSGFFNT TASFRRSPCP ALNVLANHGH LPRNGQGITK DQIGSALKSV LNQGDDAVVA LLASLPDTIA LSDLSQHNVW  DHDASLVHTD AHFGHDPSEV NISLANDLFN RGKISNKLGV NEVGNAYKDR RQAGKSYEPK YSLSDAQKTQ SYSQGAGLLL VFGAKNGESV SLDVARSFLI DERIPQGWKP AATPITVADS 
RATSAKIREV AEAM 

Retrieve as FASTA  
Remarks Complete sequence from genomic (1 exon, Softberry predict 4 exons!) and 2 ESTs (AAN31510 and BE7776736). Strain="DDR7602", "T30-4".
DNA
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTACATCGCC TCGGCGACCT CACGAATCTT GGCAGAGGTG GCACGAGAGT CAGCAACAGT GATAGGAGTA GCAGCGGGCT TCCATCCCTG CGGGATCCTC TCGTCGATGA GAAAGGAGCG  AGCGACGTCC AACGAAACGC TCTCTCCGTT TTTTGCGCCG AAGACCAGCA AGAGACCTGC CCCCTGACTG TACGACTGGG TCTTTTGCGC GTCCGAGAGG GAATATTTTG GCTCGTAAGA  TTTACCTGCT TGGCGGCGGT CCTTGTAGGC ATTTCCCACC TCATTGACGC CCAGCTTATT GCTAATTTTC CCACGGTTGA AGAGGTCGTT GGCCAGCGAG ATGTTGACCT CGGACGGGTC  ATGGCCGAAA TGCGCGTCAG TGTGAACGAG TGACGCATCG TGATCCCAGA CGTTATGCTG GGACAGGTCG CTAAGCGCGA TGGTATCGGG CAAGCTCGCC AGTAGCGCAA CCACGGCGTC  GTCTCCCTGG TTCAAGACCG ACTTGAGGGC AGATCCAATC TGGTCCTTGG TGATGCCTTG GCCGTTACGC GGTAGGTGAC CGTGGTTGGC GAGCACGTTA AGTGCGGGAC AGGGTGAGCG  GCGGAAAGAT GCCGTGGTGT TGAAGAAGCC CGAGACCACG TGTCCCGAAG GTCTGAAGAA CTCTCCGACA GCGAGCTTGT TGGGGTCGAG GATCCGGCTG CTGCTCGAGC TCACAAACGA 
GGCGACAGCG ACGGCGACGG CGACGATAGA GGCGCATGAA ACCAT 

Retrieve as FASTA  
CDS
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.........1.........2.........3.........4.........5.........6.........7.........8.........9.........0.........1.........2
CTACATCGCC TCGGCGACCT CACGAATCTT GGCAGAGGTG GCACGAGAGT CAGCAACAGT GATAGGAGTA GCAGCGGGCT TCCATCCCTG CGGGATCCTC TCGTCGATGA GAAAGGAGCG  AGCGACGTCC AACGAAACGC TCTCTCCGTT TTTTGCGCCG AAGACCAGCA AGAGACCTGC CCCCTGACTG TACGACTGGG TCTTTTGCGC GTCCGAGAGG GAATATTTTG GCTCGTAAGA  TTTACCTGCT TGGCGGCGGT CCTTGTAGGC ATTTCCCACC TCATTGACGC CCAGCTTATT GCTAATTTTC CCACGGTTGA AGAGGTCGTT GGCCAGCGAG ATGTTGACCT CGGACGGGTC  ATGGCCGAAA TGCGCGTCAG TGTGAACGAG TGACGCATCG TGATCCCAGA CGTTATGCTG GGACAGGTCG CTAAGCGCGA TGGTATCGGG CAAGCTCGCC AGTAGCGCAA CCACGGCGTC  GTCTCCCTGG TTCAAGACCG ACTTGAGGGC AGATCCAATC TGGTCCTTGG TGATGCCTTG GCCGTTACGC GGTAGGTGAC CGTGGTTGGC GAGCACGTTA AGTGCGGGAC AGGGTGAGCG  GCGGAAAGAT GCCGTGGTGT TGAAGAAGCC CGAGACCACG TGTCCCGAAG GTCTGAAGAA CTCTCCGACA GCGAGCTTGT TGGGGTCGAG GATCCGGCTG CTGCTCGAGC TCACAAACGA 
GGCGACAGCG ACGGCGACGG CGACGATAGA GGCGCATGAA ACCAT 

Retrieve as FASTA