Entry information : BrPrx55-1Aa_other (Bra008775 )
Entry ID 4252
Creation 2007-01-12 (Christophe Dunand)
Last sequence changes 2007-01-12 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-24 (Christophe Dunand)
Peroxidase information: BrPrx55-1Aa_other (Bra008775 )
Name (synonym) BrPrx55-1Aa_other (Bra008775 )
Class Class III peroxidase    [Orthogroup: Prx029]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx55-1Aa_other
start..stop
S start..stop
BnPrx55-3_other 624 0 1..313 20..332
BnPrx55-2_other 624 0 1..322 11..334
BnPrx55-1_other 588 0 11..308 21..318
BrPrx55-1Ab_other 580 0 1..322 11..332
Literature and cross-references BrPrx55-1Aa_other (Bra008775 )
Literature Kwon,S.J., Yang,T.J., Kim,J.A., Park,J.Y., Kim,J.S., Jin,M., Lim,K.B., Lim,M.H., Choi,B.S., Seol,Y.J. and Park,B.S. Korea Brassica Genome Project (KBGP)
DNA ref. GenBank:   AC189564 (45615..47036)
Protein sequence: BrPrx55-1Aa_other (Bra008775 )
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   322 (302)
PWM (Da):   %s   34429.08 (32082.0)  
PI (pH):   %s   4.96 (5.11) Peptide Signal:   %s   cut: 21 range:21-322
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MMLWFLVGML FFCMVPESNA QLSENFYAST CPNVELIVRQ AVTTKYQQTP ITAPGTLRMF FHDCFVGGCD ASVLIASDNG DAEKDAHDNI SLAGDGFDTV AKAKLAVEAQ CPGLVSCADI  LALAARDVVV LAGGPGFKVE LGRRDGLVSH ASSVDGKLPG PELDVTGLVN LFASNGLSIT DMIALSGAHT LGFSHCDRFA HRLYNFSALM PVDPTLDPAY AQQLMQTCPR VGSEPNVVST 
LDATTPDVFD NAYFQNLVAR KGLLTSDQVL FNDFRSQATV VRFANNAEDF NSAFTSAMRK LGRVGVKVGK QGEIRKDCSA FN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (introns 1 and 2). Cultivar="Inbred line Chiifu". No EST. Incorrect predcition from Phytozome: large part of the first exon is missing.