Entry information : BrPrx28-1Aa_other (Bra001084)
Entry ID 4253
Creation 2006-12-26 (Christophe Dunand)
Last sequence changes 2006-12-26 (Christophe Dunand)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2012-07-23 (Christophe Dunand)
Peroxidase information: BrPrx28-1Aa_other (Bra001084)
Name (synonym) BrPrx28-1Aa_other (Bra001084)
Class Class III peroxidase    [Orthogroup: Prx130]
Taxonomy Eukaryota Viridiplantae Streptophyta Brassicaceae Brassica
Organism Brassica rapa    [TaxId: 3711 ]
Cellular localisation N/D
Tissue type N/D
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value BrPrx28-1Aa_other
start..stop
S start..stop
TsPrx28 560 0 1..323 1..320
AlyPrx28 530 0 1..323 1..321
AtPrx28 528 0 1..323 1..321
BstrPrx48 526 0 1..323 1..322
Literature and cross-references BrPrx28-1Aa_other (Bra001084)
Literature Kwon,S.J., Yang,T.J., Kim,J.A., Park,J.Y., Kim,J.S., Jin,M., Lim,K.B., Lim,M.H., Choi,B.S., Seol,Y.J. and Park,B.S. Korea Brassica Genome Project (KBGP)
DNA ref. GenBank:   AC189185 (67995..70184)
Protein sequence: BrPrx28-1Aa_other (Bra001084)
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   323 (302)
PWM (Da):   %s   34703.43 (32309.0) Transmb domain:   %s   i7-26o
PI (pH):   %s   6.02 (5.33) Peptide Signal:   %s   cut: 22 range:22-323
Sequence
Send to BLAST
Send to Peroxiscan
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
MKIAKFSVLL LILYIFPVAF SQLRVGFYSQ SCPNAEIIVQ NLVRERFGLD PSITAALTRM HFHDCFVQGC DASLLIDPTT TQPSPEKNAG PNGSVRGYEL IDEIKTALEA QCPSKVSCSD  IVTLATRDSV FFGGGPSYVV PTGRRDGFVS NSEDAEGILP GPGLPVPDML TFFGNKGMDV FDAVALLGAH TVGIGSCGNF VDRLTNFQGT GQPDPTMDPG LAGRLRNTCS AGGSQFAALD 
QSTPFAPFSF DNLFYTQIRE RKGVLLLDHL LATHPSTSGV VFQYAANNEL FKRQFAIAMV KMGSVDVLTG FAGEIRRNCR AFN 

Retrieve as FASTA  
Remarks Complete sequence from genomic (intron 1 and 3). No EST. Cultivar="Inbred line Chiifu", sub_species="pekinensis".