Entry information : XlPGHS01
Entry ID 4271
Creation 2006-12-27 (Christophe Dunand)
Last sequence changes 2016-01-22 (Achraf Jemmat)
Sequence status complete
Reviewer Christophe Dunand
Last annotation changes 2016-01-22 (Christophe Dunand)
Peroxidase information: XlPGHS01
Name XlPGHS01
Class H synthase    [Orthogroup: PGHS001]
Taxonomy Eukaryota Metazoa Chordata Amphibia Pipidae Xenopus
Organism Xenopus laevis (African clawed frog)    [TaxId: 8355 ]
Cellular localisation N/D
Tissue type Ovaries
Inducer N/D
Repressor N/D
Best BLASTp hits
Perox score E-value XlPGHS01
start..stop
S start..stop
XtPGHS01 1132 0 1..587 1..588
GgaPGHS01 941 0 18..577 71..630
EcabPGHS01 904 0 25..575 32..582
BtPGHS01 899 0 25..576 33..584
Literature and cross-references XlPGHS01
Literature Klein SL et al., Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Dev. Dyn. 225 (4), 384-391 (2002)
Protein ref. GenBank:   NP_001091389.1 UniProtKB:   A0A9J3
mRNA ref. GenBank:   NM_001097920.1
Protein sequence: XlPGHS01
Sequence Properties
first value : protein
second value (mature protein)
Length (aa):   %s   587 (569)
PWM (Da):   %s   67635.42 (65686.5)  
PI (pH):   %s   7.51 (7.52) Peptide Signal:   %s   cut: 19 range:19-587
Sequence
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Send to Peroxiscan
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MAGLCLTMLF MIVTSSYSLE VSTKVNPCCY YPCQHKGVCV RFEMEEYQCD CTRTGYYGTN CTIPEWWTKF RELIRPSPAF YHYILTRFKW FWDIINSTFI RDFIVRLVLT VRSNLIPSPP  TYNSEYGYIS WEAYSNVSYF TRVLPPVPHD CPTPMGTKGK KELPDATFLV ETFLKREKFI PDPQGTNLLF AFFAQHFTHQ FFKTYGRMGR GFIKGFGHGV DLSHIYGDSL ERQQILRLFK  DGKLKYQIIN GETYPPTVVE APVHMIYPEN VPKEKQFAVG QEVFGLLPGL MMYATLWLRE HNRVCDVLKK EHPTWDDEQL FQTTRLILIG ETIKIVIEDY VQHLSGYYLK LKFDPELLFG  VQFQYRNRIA VEFNQLYHWH PLMPEKFKII EDEFGYSSFI YNTSIILDYG VEALVESFTK QIAGKIGGGK NHPPSLLKVA AGVIEESRNL RLQPFNEYRK RFGLKAYKSF RDLTGEEKMA 
AQLEEFYGDI DALEFYVGLL LEKPNPNSIF GESMVEIGAP FPLKGLLGNP ICSPEYWKPS TFGGETGFNI VKTASIQKLV CLNVKTCPFV AFHVPDVLPT LKKSDEL 

Retrieve as FASTA  
Remarks Complete sequence from mRNA.
CDS
Send to BLAST
.........1 .........2 .........3 .........4 .........5 .........6 .........7 .........8 .........9 .........0 .........1 .........2
ATGGCTGGAC TCTGTCTTAC TATGCTGTTT ATGATTGTCA CCAGTTCATA TTCCCTGGAA GTTTCAACTA AAGTGAATCC ATGCTGCTAC TACCCCTGTC AGCACAAGGG TGTTTGTGTG  AGGTTTGAAA TGGAGGAATA CCAATGCGAC TGCACCCGGA CAGGCTATTA TGGTACCAAC TGCACAATCC CTGAATGGTG GACCAAATTT CGGGAATTAA TTCGTCCAAG TCCTGCTTTT  TATCACTACA TTTTGACCAG ATTTAAGTGG TTTTGGGATA TAATCAATTC TACCTTCATA CGTGATTTCA TTGTGAGACT TGTTTTGACA GTGCGTTCAA ATTTGATACC TAGCCCACCA  ACATACAATT CTGAGTATGG TTACATTAGC TGGGAGGCGT ATTCTAACGT AAGCTACTTT ACACGGGTTC TTCCTCCTGT GCCACATGAT TGTCCTACTC CAATGGGAAC AAAAGGAAAA  AAGGAACTCC CAGATGCAAC TTTTCTTGTG GAGACATTTC TGAAAAGAGA AAAATTCATC CCTGACCCAC AAGGCACAAA CCTCCTCTTT GCCTTCTTTG CCCAGCATTT TACACATCAG  TTTTTCAAGA CATATGGCAG GATGGGACGG GGTTTCATTA AAGGATTTGG CCATGGTGTT GATCTTAGTC ATATTTATGG AGACAGTTTG GAACGCCAGC AGATTCTTCG CCTCTTCAAA  GATGGAAAAC TCAAATATCA GATAATAAAT GGGGAAACAT ATCCTCCAAC AGTAGTTGAA GCTCCAGTCC ATATGATTTA TCCAGAAAAT GTCCCCAAGG AGAAGCAATT CGCAGTAGGG  CAGGAGGTAT TTGGACTCCT CCCTGGATTG ATGATGTATG CAACCCTTTG GCTCCGCGAA CACAATAGGG TTTGTGATGT TCTGAAGAAG GAGCACCCTA CTTGGGATGA TGAGCAGCTG  TTTCAAACTA CAAGACTAAT TCTTATAGGG GAGACTATAA AGATCGTCAT TGAAGACTAT GTTCAGCATC TAAGTGGATA TTATTTGAAA CTAAAATTTG ATCCAGAATT ACTGTTTGGC  GTGCAGTTCC AGTACAGGAA TCGGATTGCT GTTGAGTTCA ACCAGTTATA TCACTGGCAT CCTCTTATGC CGGAGAAATT TAAAATTATC GAAGATGAAT TCGGCTATAG CAGCTTCATC  TACAATACTT CCATTATTTT AGACTATGGC GTTGAGGCTC TGGTGGAATC CTTCACAAAA CAAATTGCTG GCAAGATTGG TGGCGGAAAG AATCATCCAC CTAGTCTGTT GAAGGTGGCT  GCAGGTGTTA TTGAAGAATC CCGAAACCTC AGACTACAAC CTTTCAACGA ATATCGAAAG AGATTTGGAT TGAAGGCTTA TAAATCATTC AGAGATTTAA CAGGAGAAGA AAAAATGGCA  GCACAATTGG AAGAGTTTTA TGGAGACATA GATGCACTTG AATTTTACGT GGGGTTACTT TTGGAAAAAC CCAATCCAAA TTCAATATTT GGAGAAAGTA TGGTGGAAAT AGGTGCACCG  TTCCCTCTTA AAGGACTACT GGGGAACCCA ATTTGCTCTC CAGAATACTG GAAGCCCAGT ACCTTTGGGG GAGAAACTGG GTTTAATATT GTAAAGACTG CCTCTATTCA GAAGCTTGTG 
TGTCTCAATG TAAAAACATG CCCATTTGTT GCATTCCATG TGCCAGATGT ATTACCTACA TTAAAAAAAT CTGATGAGCT T 

Retrieve as FASTA